Gene Cpin_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0133 
Symbol 
ID8356232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp159381 
End bp162023 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content34% 
IMG OID644962277 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003119837 
Protein GI256419184 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGAA TATTACCACT AACAACAGTG TTTGTGATTA TATTACTCTT ACTGGAAGGT 
ATAGAAGTAG TGGCCCAAAG TAAGGTAATT AATGAAAGTA CATATCAATC ATGGCCGATA
TTAGGTAGTT CTGCAATTAA TGGGAATGGT AGATATGTAA GTTATTTCGT GAAAAATTAT
TTTTCACCAG AATCCAATTT GCATATCTCA TCTTCTGATG GAAAAAAGCG AATCCAGATT
AATAATTGTC ATTGGGCAGA ATTTATATCA GGAAATAGGA TTGTATTTTT GCAAAATGAT
CAAAATTTAT CATTTGTAGA TCTTAAAGAG TTTAAGTTAA TTAAAAAAAT ATCTCGAGTT
GGAGACATGA AAATTATTGG CAATACACTG AATAAATTTT TATTATATCG ATTACAAGGT
AGCGATTCTA TTTGTTTGTT CAGTTTGCTA GATGGTCGAG TTACATGGTT TGGAGGAATA
GATTCTTATG ATGTTAGTAA AGATGAGAAG TTCTTACTCT TGAAAACTAA GTCACAATTA
AGTCGAGAAG GTAGTGAAAT AACTTACTTT AATGTCAATT CAAAAAATGA AAAAAAGATT
CGAATAGCAG GTAATGTTAT TAGCATGGCC ATACAGTCAG ATGATAAGGG AATGGCATTT
GTGAGTGAAG AATTTGCAGG TTACGGTCGT AAGCTATGGT TTTATAATGT AGCTCAAGAT
CACTTGCAAC TCTTGCTTGA CAGTGTAGCT ACCAAAAATT TTTTTAGTTA TGAATGTTCT
ATTTCTGGTA ATAGTATAAC ATTTAGTGAT ATAGGGGATA AGATTTTTTT TAATATTGAC
AGAAAGGGTT CTTCTAAACA AGAAAGGAGA AGTGGAGAAG TAATAGTATG GTCATATAAA
GATAAGATAT TGGAGTCTCA AAAGATTTGG CTAGGATATG GATTAGAGAA AGAAAGTATT
TATTGTGTAT TCAATTTGAA GACTAAAACA TTCTTGAAAC TTGATGAATC TGCAGATATT
ATTAATGTAA AAGGCATGTT CAATAGATAC GCAGTTGTTT TGCCTAATAA GGCGACCTTA
TGGTTTCAAA ATATAGAATC TCCAGATTCG CTATTTATTA TTGATACTGA TTCTGCCTAT
GGTTCTAAGG AATACTTGCC TGCATCTATA TACTCTGATC CAATATTGTC CCCAGATGAA
CGCTTTGTTG TATGGTTTGA CAAAAAGACT TTAAAATATT ATTCTTACGA TATTCGAAAT
CATAAGATAC ATAACATAGA TAAATCAATT CCTACACTTC TATATGATCA AGATGCTGCT
AAAATAAGGA GAATTGGAAC TTGGGGAATC GCTGGATGGA TACCGGAGGA GAAATCGATC
TTGGTATATG ATCAATTTGA TATCTGGAAA TTAAGTTTAG AGGATTCTCA GTCTGCGGTA
AATATTACTG AGGGAGAAGG TAGGAAAAAT AGAATAACGT TGACTATTAA AGGGAGAAAC
TATTTAGATA CCTTTTCTCG GAAGCAAAAC TTGATAATAA TTGGGTATAA TAGAGAAAAT
AAAGATGGAG GGTACTGGAA GCTGCAATTA GGAAAGAAAT TTCGTTTAGC CCCAGATCAT
TTAAATCCAT TCTCTGTATC ATCTAGGACT CCATATGGAA TATATTATAG TGCAAGCGGT
GATGTGATTT CCGCAAGGAA CGCCGATATG CATATTGTAG TTCGTGAGAG TGCTGCCGAG
TCATCAAATA TTTATATAAC AAGCGATTTT AAAAGTTATA CTAAACTATC GAATGTTAAT
CCAGAAAAGG AATATAAGTG GATGACAAGC GAATTAGTTG AATGGAAAGC ATTTGATGGA
AGAATATGCC AAGGCCTTTT GTATAGGCCC AGTGATTTTG ATTCCACCAA AAGGTATCCT
TTGATTTTAA ATTATTATGA GAAGAGAAGT GACGAGTTGC ATAAATTTAT TATTCCTGAT
TACTCCAAGG ATAATTTAAA TATACCAAGT TTCGTTGATG CAGGATTCTT AATCTTTGTT
CCAGATATTT ATTCGACGCC AGGTTTTAAT GGAGAAGGTA CTTATAATTG TATTGAATCT
GCAACAAAAT TTCTTTCAAC ATTTTCGTAT GTTGATTCTA ACAAAATCGC TTTGCAAGGG
CATAGCTATG GTGGTTGGCA GACGAATTAC ATGGTAACTC ATTCTAATAG ATATGCTGCT
GCCTGTGAGG CTGCTGGGGT TGCTGATCAA ATAAGTGGTT ATGGTCAATT GGCATACAAC
TTTGGCGGAG ATAGACAAAT GTTTTATGAG CTCAATAGCC AGGGAAGTCC ATATGGATTA
GGTATCACTC CCTGGACGAA ACCTGATTTA TATATTAAGA ACTCTCCTAT TTTTAACGTT
GGTAATATTG TTACGCCACT CCTAATGATG CACAATCGCG ATGATGAGGC TGTCCCTTTT
AGTCAAGCTG TAGAGTTTTT TTTGGCATTA AGGAGAGCGA GTAAGAAGGT TTGGTTGTTG
CAGTATGTCG GAGAATATAG TCATCAAGTA ACAGGACCGG CTGCGAAGGA TTATCATACG
AAAATGCTAC AGTTTTTTGA GCACTATTTA AAAGGTGAAA GCTGTCCATC ATGGATGCAA
TGA
 
Protein sequence
MRRILPLTTV FVIILLLLEG IEVVAQSKVI NESTYQSWPI LGSSAINGNG RYVSYFVKNY 
FSPESNLHIS SSDGKKRIQI NNCHWAEFIS GNRIVFLQND QNLSFVDLKE FKLIKKISRV
GDMKIIGNTL NKFLLYRLQG SDSICLFSLL DGRVTWFGGI DSYDVSKDEK FLLLKTKSQL
SREGSEITYF NVNSKNEKKI RIAGNVISMA IQSDDKGMAF VSEEFAGYGR KLWFYNVAQD
HLQLLLDSVA TKNFFSYECS ISGNSITFSD IGDKIFFNID RKGSSKQERR SGEVIVWSYK
DKILESQKIW LGYGLEKESI YCVFNLKTKT FLKLDESADI INVKGMFNRY AVVLPNKATL
WFQNIESPDS LFIIDTDSAY GSKEYLPASI YSDPILSPDE RFVVWFDKKT LKYYSYDIRN
HKIHNIDKSI PTLLYDQDAA KIRRIGTWGI AGWIPEEKSI LVYDQFDIWK LSLEDSQSAV
NITEGEGRKN RITLTIKGRN YLDTFSRKQN LIIIGYNREN KDGGYWKLQL GKKFRLAPDH
LNPFSVSSRT PYGIYYSASG DVISARNADM HIVVRESAAE SSNIYITSDF KSYTKLSNVN
PEKEYKWMTS ELVEWKAFDG RICQGLLYRP SDFDSTKRYP LILNYYEKRS DELHKFIIPD
YSKDNLNIPS FVDAGFLIFV PDIYSTPGFN GEGTYNCIES ATKFLSTFSY VDSNKIALQG
HSYGGWQTNY MVTHSNRYAA ACEAAGVADQ ISGYGQLAYN FGGDRQMFYE LNSQGSPYGL
GITPWTKPDL YIKNSPIFNV GNIVTPLLMM HNRDDEAVPF SQAVEFFLAL RRASKKVWLL
QYVGEYSHQV TGPAAKDYHT KMLQFFEHYL KGESCPSWMQ