| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0127 |
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| Symbol | |
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| ID | 8356226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 154518 |
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| End bp | 155270 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962271 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003119831 |
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| Protein GI | 256419178 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGTT TAAAGAATAA AGTAGCAATT GTTACAGGAT CAGCAAGAGG ATTAGGTAAA
GCCATCGCAG AACGTTATGC CGCACTTGGC GCTGATATAG TAGTGAACTA CTCCAGAGAT
AAAGCCTCCG CTGATGAAGT AGTAGGCAAT ATTAAAGCCA TGGGCGGAAG AGTGATCGCC
GTACAGGCAG ATGTAAGTAA GGTTGCAGAT ATCGAGCGAC TGTTCAGTGA AGCCAAAGCA
GCTTTCGGAA AAGTGGATAT CGTAGTGGCA AATGCGGGTA TCGAACTGGT AGAAACACCC
GTAACAGATT TCACAGAAGA ACAGTTTGAC CGCGTATTCT CTATCAATAC CAAAGGCTCT
TACTTCACCA TGCAACAAGC GGCCAGACAG GTAGAAAACA ATGGACGTAT CATATATGTT
GCCTCCAGCA CCACCTCCTT CCCCGTACCT GGTATGGCCG TATATGGTGG CAGCAAGACC
ACTCCCCGCT ACATGGTAGA TGTACTGTCT AAAGAAATCG GACACAGAGG CGTAACGGTG
AACTCTATCA TACCTTTCGC TGTTGATCAT TCTGGTATCT TCGTAGACCC CGCAGCATAT
CCTGAACTGA GAAAGCAATT GCTGGATAGT TGTCCGATGG GGCGTCTGGC AGAAGTGGAA
GACGTTGCTA ATCTCGCGGA GTTCTTCGCA AGCGACTTGT CTTCATTTGT TTCCGGTCAG
CATTTGCTGG TAAATGGTGG AGCTACAAAC TAA
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| Protein sequence | MNSLKNKVAI VTGSARGLGK AIAERYAALG ADIVVNYSRD KASADEVVGN IKAMGGRVIA
VQADVSKVAD IERLFSEAKA AFGKVDIVVA NAGIELVETP VTDFTEEQFD RVFSINTKGS
YFTMQQAARQ VENNGRIIYV ASSTTSFPVP GMAVYGGSKT TPRYMVDVLS KEIGHRGVTV
NSIIPFAVDH SGIFVDPAAY PELRKQLLDS CPMGRLAEVE DVANLAEFFA SDLSSFVSGQ
HLLVNGGATN
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