Gene Cpin_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0123 
Symbol 
ID8356222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp152481 
End bp152993 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content42% 
IMG OID644962267 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003119827 
Protein GI256419174 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTACTAA CCCTTGCCCT ATTGTTTGCC GCCAATGTGA TATACGCACA GTCTTCTCTC 
AAAGCTGGAG ACAAACTGCC CTTGTTTGTT TTGAAAGACC AGGATGGAAA TGATTTTGTG
GTGAGTGAAT ATATAGGAAA ACACAAGCTG GTCATCTTTT TTTATCATAA AGACGACAGT
GAGATGGCTG TAAAGGAAGT CTGCGGTTTC AGAGATAGTT ATCCGGATTT CAAAGCCGCC
AATGCCATGA TCATCGGTAT TGGCAATGGT AGTGTTGAAA GTCATAAGGC TTTCCGGAAA
CAGCATAATC TGCCGTATGT GCTGCTGAGT GATCCTCAGA ATGACGCATT GAGGCTGTTT
GGTTCGAAAA CTGGATTCTT TCACGATATG AGAGACACAT TCATTACAGA TCTGGGTGGG
AATATCACAT ACACCTACCG TGGCCATTTT AAAAAAGGAG AAATCTACTC TGAGAAAGTG
CTGAGTTATC TCAGAACTGA CGGAGTCAAC TAA
 
Protein sequence
MLLTLALLFA ANVIYAQSSL KAGDKLPLFV LKDQDGNDFV VSEYIGKHKL VIFFYHKDDS 
EMAVKEVCGF RDSYPDFKAA NAMIIGIGNG SVESHKAFRK QHNLPYVLLS DPQNDALRLF
GSKTGFFHDM RDTFITDLGG NITYTYRGHF KKGEIYSEKV LSYLRTDGVN