| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0109 |
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| Symbol | |
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| ID | 8356208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 134350 |
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| End bp | 135579 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644962253 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_003119813 |
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| Protein GI | 256419160 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCC GGCAGTATTG GTCCCTGATT TTAATCCTGG GAACCATGAC CGCATTAGGG
CCATTTTCAA TAGATATGTA TCTGTCCGGA TACCAGGCCA TCGCAGAAGA CCTGCATGTC
CCTACAGAAC GCATCGGGTT ATCACTCGCC AGTTACTTTA TCGGTATCTC TGCGGGACAA
TTACTATACG GCCCCTTACT GGATCGTTTT GGCAGAAAGA AACCGCTTTA TGCCGGACTG
ATCGTCTACC TGATCGCCTC TGCAGGATGT ATTGCGGCAA GATCACTGGA GTCTTTTGTA
CTCCTGCGCT TTATTCAGGC CATCGGTAGC TGTGCGGCGG CTGTAGCCTC TGTTGCCATG
GTACGCGACT TATTCCCGAT AAAAGACAGT GCAAAAGTTT TCGCACTACT TATGTTAGTA
GTAGGCGCCT CTCCTATGCT GGCTCCGACC ATTGGTGGCT ATATTACAGC TGCCTGGAAC
TGGCAGGCTA TCTTTATCGT ATTGGGTGGG ATGGGGTTAC TGCTGATGAT CGCCTGCTTT
GCCTTTCTGC CTGAAAGCCA TCAGCCGGAT ACTTCCATGT CACTGAAACC GGGTCCTATT
ATCAACGGAT TCTGGGCCGT GATGCGGGAA CCACAATTCT ATACCTATGC ACTGACGGGT
GCATTTGCAT TCTCCGGCCT GTTTGTATAT GTATCGTCTT CCCCCGTGGT ATTCATGAAT
ATCTTCCGTG TATCTGAAAC ACATTTCGGA TGGATCTTCG CGGGATTATC CGTTGGGTTT
ATCGGTTCCA GTCAGCTGAA CAGTCTGACC TTACGCTATT TCCGCAGTGA ACAGATCATC
CGTATTGCAC TGATAGGACA GGCACTGATC GGTATCGTTT TCTTTGCCGG CAGTTACCTG
GGATGGTTCG GACTGACATC GACGATTATT ATGTTATTCC TCTATCTGAG CTGTCTGGGA
TTTGCCAATC CGAATGCGTC TGCACTGAGT ATCGCACCGT TTAAGAAAAA TGCAGGTACC
GCAGCGGCAC TGATGGGCGC ATTACAGATG GGTATCGGCG GACTGGCTTC CACCGTGGCC
AGTTTGTTCC ATGCAACATC TCCTGTTCCT ATGACCATGC TGATGGCAGC AACAGCACTG
ATATCAGTTG CTATATTGTT CCTGGGAGGA TTACGTATTA CCAATCCCGT TTTCCTGCAT
GATGGCGGCG ATACGGTAGT ACTCCACTAA
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| Protein sequence | MPARQYWSLI LILGTMTALG PFSIDMYLSG YQAIAEDLHV PTERIGLSLA SYFIGISAGQ
LLYGPLLDRF GRKKPLYAGL IVYLIASAGC IAARSLESFV LLRFIQAIGS CAAAVASVAM
VRDLFPIKDS AKVFALLMLV VGASPMLAPT IGGYITAAWN WQAIFIVLGG MGLLLMIACF
AFLPESHQPD TSMSLKPGPI INGFWAVMRE PQFYTYALTG AFAFSGLFVY VSSSPVVFMN
IFRVSETHFG WIFAGLSVGF IGSSQLNSLT LRYFRSEQII RIALIGQALI GIVFFAGSYL
GWFGLTSTII MLFLYLSCLG FANPNASALS IAPFKKNAGT AAALMGALQM GIGGLASTVA
SLFHATSPVP MTMLMAATAL ISVAILFLGG LRITNPVFLH DGGDTVVLH
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