Gene Cpin_0099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0099 
Symbol 
ID8356196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp118800 
End bp119306 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content49% 
IMG OID644962243 
Productmethionine sulfoxide reductase A 
Protein accessionYP_003119805 
Protein GI256419152 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.101937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAC AAACTGCAAT ACTCGCCGGT GGTTGTTTTT GGGGTGTAGA GGAGCTCATC 
CGTGCACTGC CCGGGGTAAG CAAAACTATA GTAGGTTATA CGGGGGGAGA TGTGCCTAAC
GCAACCTACC GTAACCATGG TAGTCATGCG GAAGGGATCA AGATTGAGTT TGATCCGAAT
GTCCTTTCTT ACCGTAAATT GTTGGAATTC TTCTTCCAGA TTCACGACCC TACCACCCGC
AACAGGCAGG GAAATGATAT CGGAACCTCC TACCGCTCCG CCATCTTCTA CCTGGATGAA
GCACAACAGC AGACAGCGGT TGAGCTGATA AAAGAACTGA ATGCCGCCGG TATCTACAAG
CATCCGATCG TGACCGAAGT AGTACCCGCA GCTGATTTCT GGGACGCAGA AGAAGAACAC
CAGAACTACC TGCAGAAACA TCCTTTCGGA TATACCTGTC ACTTTATCCG CCCGGAATGG
CAATTAGCGA CTTCAGAAGG TAAATAA
 
Protein sequence
MSIQTAILAG GCFWGVEELI RALPGVSKTI VGYTGGDVPN ATYRNHGSHA EGIKIEFDPN 
VLSYRKLLEF FFQIHDPTTR NRQGNDIGTS YRSAIFYLDE AQQQTAVELI KELNAAGIYK
HPIVTEVVPA ADFWDAEEEH QNYLQKHPFG YTCHFIRPEW QLATSEGK