Gene Cpin_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0092 
Symbol 
ID8356189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp110267 
End bp110995 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content43% 
IMG OID644962237 
Producthypothetical protein 
Protein accessionYP_003119799 
Protein GI256419146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC CAATTCAAAA CACACCCGAC CAACATGGGT TTATTCTGAA CGGGACAGAG 
ACATTATACG TTTGTCATCT GCCTATGTTC AATATGCCTA ATCACATGTA CCAGGTAACA
CTGGAAATAA CTATTCCTGC GGATGCTCTC GCACAATACC TTGCAGACAG ACAATCCAAT
CCTGGCAACT TCTATGTGTT AGGTAATCTG CAAACAGATC TCTTCACCAT TCCTGATGTC
ATGTTGGGAA AGATTAAAAA CTTTCAGGCA GATATTTTCA GAGGTATGCC GCAGGACCCT
AATTCGGATA CACCACTTAT CCATAACGTG CAGACTACCA TCACCCGCAT CATATATGCA
CGTCATTTCG ATTACAGCAT ACCTTATCCG GAAGAGATGA CTTACATCAT TTTCGGTAAC
GAGAAAGAAG CATTCCTCGA TCACTATCTG ACAAAAGAAG AAGACTTTCT CAATATTCTC
TCACTCAGCG AGACGCCAGC ATGGTTACCT GTAGATCAAC TGGCTATTTC TGCGAATGCT
GGCTTCATCG GTATGCCGGG TACACCAATG CCGGAAAATC CTCCTTTATC AGCCGGCACT
TATAAAATTA CTTTCCAGGG ACAGGATCAG GTATACGAAC TACAGGTCGG AGACAACATC
TTCTTCGATA CAGAAATTGT AAACGTACCG ATGGAAGAAC ACGCCATGAA AGGATTCTAC
ACTTATTAG
 
Protein sequence
MKNPIQNTPD QHGFILNGTE TLYVCHLPMF NMPNHMYQVT LEITIPADAL AQYLADRQSN 
PGNFYVLGNL QTDLFTIPDV MLGKIKNFQA DIFRGMPQDP NSDTPLIHNV QTTITRIIYA
RHFDYSIPYP EEMTYIIFGN EKEAFLDHYL TKEEDFLNIL SLSETPAWLP VDQLAISANA
GFIGMPGTPM PENPPLSAGT YKITFQGQDQ VYELQVGDNI FFDTEIVNVP MEEHAMKGFY
TY