Gene Cpin_0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0090 
Symbol 
ID8356187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp109177 
End bp109734 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content47% 
IMG OID644962235 
Producthypothetical protein 
Protein accessionYP_003119797 
Protein GI256419144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAACC AGCTTATCAC AATGGCAGCA TGTCTGTCAA TTTTCTCATT CACTGCTTGC 
CAGCAGTCCC AAAACGCACA AAGTGCAGAG AATGACACTA CCCAACAAGC AGCACCTGAC
ACGACTGCTA CTGTAGCGGA AACACCAGCA GCAGATACCA GTGCTGCAGC AGCCCTGACA
ACCGTAATGT CTGCCCCTGA AAAAGTAAAA GCAGGTGCTC CGATCATGGT GAAATTTACA
GTAACCAACA ATTCCGATAA GGAAGCTGAG TTCTGTAAAT GGCACACACC ATTCGAAGAG
AAATTCCTGA ATTCCTTCTT CGAGATCCAG GACAGCAAAG GGGAGTCTGC GCAGTACCAG
GGTGTAATGG CAAAAAGAAT CATGCCTCCT CCGGCAGAAT CATTCATTAA AGTGCCTGCA
AAAGGAACTG TATCTGCAGA GATTGATCTG ACCAAAGGTT ATAAGATCTC CGCTCCTGGT
ACTTACAAAG TAGCCTACCA GGGTGACGGT ATCAGTGGTC TGAAGAATGT AAACACAGTA
TCTGTGACTG TCGAGTAA
 
Protein sequence
MRNQLITMAA CLSIFSFTAC QQSQNAQSAE NDTTQQAAPD TTATVAETPA ADTSAAAALT 
TVMSAPEKVK AGAPIMVKFT VTNNSDKEAE FCKWHTPFEE KFLNSFFEIQ DSKGESAQYQ
GVMAKRIMPP PAESFIKVPA KGTVSAEIDL TKGYKISAPG TYKVAYQGDG ISGLKNVNTV
SVTVE