| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0087 |
|---|
| Symbol | |
|---|
| ID | 8356184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 104684 |
|---|
| End bp | 105508 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644962232 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003119794 |
|---|
| Protein GI | 256419141 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC TCCCGCTTAT CCTGCTGGCT GCATTGCTCA GCGCCTGTGC CCAGTCATCG
CTTCAACCTG TTATGGTAGC AAAAAAGATC TTCCAGGTGA ATGCAGATGA AAAATTCATC
AACGCCCACA GTACCGGTGA TTATCGTGGT AGCCCAAGCG GACGTGATCT TCCTGCCGAT
ATGCAGCGAT CCTTTCTGCT CTTACAGCAA CGTGGTGAAA ATAGTGCCGT AGCGCTCAAC
CTCCGGCAAG GCAATCTTAT CATCGATAAG TATCTCTTTT TCACAAAAGA CAGCGGCAGC
TGGAAGCTGT CGGGTATTGG TACGCCAACA CTGGCACAGC TCCATGTAAG GAAACTACGG
GCTATGCAGG CATTATCAGA AGCAGCCATT GACAGTACAC TACGGGAAGC GCAACAGTAT
ACCGATCCGG AATATAAAAC CAGGGAAGAG TTTGATTTTA TTGTTAATAG TCTGCAGTTG
AAATTAGCAC CTGACGACAC CCTGATCGCA CATTTCAATA AATATCGCCC TGCATTTGAC
AATCTGCTGG TAGCAGCCAG ACAGGCGCTC CAGCAACCAC ACGATGAATA CAATTCATTG
GTCAATACAA AAACACCGGC ATACCGTCCT TTACTGATCA GTAATATCAC CACAGGAGGT
TTCCTCCCGG CACAATGTAT CGACTTTCAT ATTCTTTATG ACCAGGTAGG TTATCTGTAT
ACACCAGATG AAAAATATCT GCCTGAACTA CGACCTGATA AAGTGATGAT GGTAAGAAAA
TTAGGCAGGG GGTGGTATCT GTATAAAGTA GCGATCTATC TGTAA
|
|---|
| Protein sequence | MNKLPLILLA ALLSACAQSS LQPVMVAKKI FQVNADEKFI NAHSTGDYRG SPSGRDLPAD
MQRSFLLLQQ RGENSAVALN LRQGNLIIDK YLFFTKDSGS WKLSGIGTPT LAQLHVRKLR
AMQALSEAAI DSTLREAQQY TDPEYKTREE FDFIVNSLQL KLAPDDTLIA HFNKYRPAFD
NLLVAARQAL QQPHDEYNSL VNTKTPAYRP LLISNITTGG FLPAQCIDFH ILYDQVGYLY
TPDEKYLPEL RPDKVMMVRK LGRGWYLYKV AIYL
|
|---|
| |