Gene Cpin_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0086 
Symbol 
ID8356183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp103462 
End bp104616 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content49% 
IMG OID644962231 
Producthypothetical protein 
Protein accessionYP_003119793 
Protein GI256419140 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACT TAATCCTATT ACTGCTACTC CTCTGCTGCG GTGCATTTAT ACCATCTCCG 
CCTGATAAAT CCATTATTGC AATATTGCGT AAGCAGGTAT TGAGAGAAGC TGCCTGGGCT
TTACAACAAG TCCCGGAAAC GGTAACAGCA CAAAGCTGTG TACGCAGCGC CGGTGGTAAA
CACGACTTTT ATTCAGAAGG TGATTACTGG TGGCCGGTCG CTGGTCAGCC GGACAGCCCC
TATGTACAAA GAGACGGTAT GACCAACCCG GATAATTTTG TTGCACACCG GCTGGCCATG
ATACGGTTCA GCCGTATTAT CGGCGCTCTG GCTTCCGCTT ACCGTATTAC CGGCGACCAA
CGATATGTCA TCGCCGCACA GGTACACCTG AAAGCCTGGT TTACTGATAC AGCGACGCTT
ATGCATCCTA ACCTGTTATA TGCACAGGCT ATTAAAGGGC GTTTTACCGG CAGGGGGATT
GGTATCATTG ATACGATTCA CCTGATGGAA GTGGCGCAGG GAGTATTGGT GATGCAGGAA
GCCACTGTTT TCGATAAGAC CTTACTGGCG GATATCAGGC GTTGGTTTGT GGATTATCTG
CAATGGCTGA CCAGCCATCC CTATGCAAAG GATGAAATGA ATGCAAAGAA TAACCATGGT
ACCTGCTGGG TAATGCAGGT GGCCAGTTTT GCCCGTTTTA CCGGAGATAC CACCTTATTA
CAGTTCTGCC GGAAAAGGTA CCAGGAAGTC CTTTTACCTA ATCAGATGGC TGCGGATGGC
AGTTTCCCGC TGGAACTGGC CAGAACGAAA CCTTATGGGT ATTCGCTGTT TAACCTGGAC
GCCATGGTCA CCATCTGCCA GATCCTCTCG GATGAAGAGC ATTCCCTCTG GACATATCAG
CTGCCTGATG GCAGGACGAT CCATAAGGGA ATCGAGTATT TGTATCCCTA TGTGGCAGAC
AAGCGTAAAT GGCCTAAAAA GCCCGATGTA ATGTATTGGG AGGAATGGCC GGTAGCACAT
CCATTTCTGG TATTTGGAGC AAATACCTGG CAGCAGCAAA CCTGGTTGGA TACCTGGAAG
AAGCTGGATC ACCAGCCTTC CAATGCAGAA GTAGTGAGAA ATTTACCTAT CAGGCATCCA
TTGATATGGT TATAG
 
Protein sequence
MKNLILLLLL LCCGAFIPSP PDKSIIAILR KQVLREAAWA LQQVPETVTA QSCVRSAGGK 
HDFYSEGDYW WPVAGQPDSP YVQRDGMTNP DNFVAHRLAM IRFSRIIGAL ASAYRITGDQ
RYVIAAQVHL KAWFTDTATL MHPNLLYAQA IKGRFTGRGI GIIDTIHLME VAQGVLVMQE
ATVFDKTLLA DIRRWFVDYL QWLTSHPYAK DEMNAKNNHG TCWVMQVASF ARFTGDTTLL
QFCRKRYQEV LLPNQMAADG SFPLELARTK PYGYSLFNLD AMVTICQILS DEEHSLWTYQ
LPDGRTIHKG IEYLYPYVAD KRKWPKKPDV MYWEEWPVAH PFLVFGANTW QQQTWLDTWK
KLDHQPSNAE VVRNLPIRHP LIWL