Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0085 |
Symbol | |
ID | 8356182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 102313 |
End bp | 103176 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644962230 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003119792 |
Protein GI | 256419139 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGA TAATACTGAT CACAGGCACA AGTACTGGTT TTGGTAAATT AATGACCCTT ACACTGGCGA AAGCAGGACA TACTGTTATT GCTGCCATGA GAGGCGTTAC AGACAAAAAT GCGGCAGCAG CAAAAGAACT GAGTGAAGTA CCTAACGTAG ATGTAGTAGA ACTGGATGTA ACAGACGATG CTTCTGTGAA GAATGCGGTG AATACTGTAT TGGCAAAACA TGGCAGAATA GATGTACTGG TAAATAATGC AGCCGTATCC GGCTTTGGAT TACTGGAATC ATGGTCCATC GATCAGATCA AAAAGATGGA AGAAGTCAAT GTATATGGTG TGATACGTAC TTATCAGGCG GTATTACCTG CAATGCGCAA AGAAAAGAAC GGATTGATCA TCAACCTCAC ATCCGGCGCC AGCGGTTTTA CCTTGCCTTT TATGGTGCCT TACCTGATGG GTAAGTTTGC TGTAGAAACG ATCACTGAAG GAGCACAGCA TGAGTTAAAA CAGTACGGTA TCGAAAACGT ATCTATACAA CCAGGTGTGT ATCCGACTGA GATGAATAAC GGTGGAAAGG CAGGCGTACA TGCAGATAAA GAAAACATCA CTGCTGAATA TGGTGAGCCG GCACAGCAAT TGTTTGGATC TATCGGTGCG GCTTTATTTG GTAAGATGGC CGAGTTTAAC ATGGATCCGC AGGTAATTGC TGACGGTGTA CTGGCACTGG TAAATATGGA AAAAGGCACT CGTCCGCTGC GCTATCCACT TGATGCAATT GCACAGGGAA CAGATAAAGA ATTTGTCGAA ACCAGGGCGG CGATTAAAGA AAAATGGACG GCGAGTTATG GTCTTTCTCT TTAA
|
Protein sequence | MKKIILITGT STGFGKLMTL TLAKAGHTVI AAMRGVTDKN AAAAKELSEV PNVDVVELDV TDDASVKNAV NTVLAKHGRI DVLVNNAAVS GFGLLESWSI DQIKKMEEVN VYGVIRTYQA VLPAMRKEKN GLIINLTSGA SGFTLPFMVP YLMGKFAVET ITEGAQHELK QYGIENVSIQ PGVYPTEMNN GGKAGVHADK ENITAEYGEP AQQLFGSIGA ALFGKMAEFN MDPQVIADGV LALVNMEKGT RPLRYPLDAI AQGTDKEFVE TRAAIKEKWT ASYGLSL
|
| |