| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0085 |
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| Symbol | |
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| ID | 8356182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 102313 |
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| End bp | 103176 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644962230 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003119792 |
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| Protein GI | 256419139 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA TAATACTGAT CACAGGCACA AGTACTGGTT TTGGTAAATT AATGACCCTT
ACACTGGCGA AAGCAGGACA TACTGTTATT GCTGCCATGA GAGGCGTTAC AGACAAAAAT
GCGGCAGCAG CAAAAGAACT GAGTGAAGTA CCTAACGTAG ATGTAGTAGA ACTGGATGTA
ACAGACGATG CTTCTGTGAA GAATGCGGTG AATACTGTAT TGGCAAAACA TGGCAGAATA
GATGTACTGG TAAATAATGC AGCCGTATCC GGCTTTGGAT TACTGGAATC ATGGTCCATC
GATCAGATCA AAAAGATGGA AGAAGTCAAT GTATATGGTG TGATACGTAC TTATCAGGCG
GTATTACCTG CAATGCGCAA AGAAAAGAAC GGATTGATCA TCAACCTCAC ATCCGGCGCC
AGCGGTTTTA CCTTGCCTTT TATGGTGCCT TACCTGATGG GTAAGTTTGC TGTAGAAACG
ATCACTGAAG GAGCACAGCA TGAGTTAAAA CAGTACGGTA TCGAAAACGT ATCTATACAA
CCAGGTGTGT ATCCGACTGA GATGAATAAC GGTGGAAAGG CAGGCGTACA TGCAGATAAA
GAAAACATCA CTGCTGAATA TGGTGAGCCG GCACAGCAAT TGTTTGGATC TATCGGTGCG
GCTTTATTTG GTAAGATGGC CGAGTTTAAC ATGGATCCGC AGGTAATTGC TGACGGTGTA
CTGGCACTGG TAAATATGGA AAAAGGCACT CGTCCGCTGC GCTATCCACT TGATGCAATT
GCACAGGGAA CAGATAAAGA ATTTGTCGAA ACCAGGGCGG CGATTAAAGA AAAATGGACG
GCGAGTTATG GTCTTTCTCT TTAA
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| Protein sequence | MKKIILITGT STGFGKLMTL TLAKAGHTVI AAMRGVTDKN AAAAKELSEV PNVDVVELDV
TDDASVKNAV NTVLAKHGRI DVLVNNAAVS GFGLLESWSI DQIKKMEEVN VYGVIRTYQA
VLPAMRKEKN GLIINLTSGA SGFTLPFMVP YLMGKFAVET ITEGAQHELK QYGIENVSIQ
PGVYPTEMNN GGKAGVHADK ENITAEYGEP AQQLFGSIGA ALFGKMAEFN MDPQVIADGV
LALVNMEKGT RPLRYPLDAI AQGTDKEFVE TRAAIKEKWT ASYGLSL
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