Gene Cpin_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0081 
Symbol 
ID8356178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp95876 
End bp97459 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content50% 
IMG OID644962226 
ProductL-amino-acid oxidase 
Protein accessionYP_003119788 
Protein GI256419135 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1231] Monoamine oxidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATCT CAAGAAGAGC CTTCTTATCC CAAACCGGGA AAGTAGCGGC TGCCTATCCG 
GCTATGCTGG CATTAGGAAT GCTGCCTCCC GCACCTGCCC ACGCCTTCGC ACTTCAGGGC
ACGGGGAACG GTAAACGTAT TGTTATCCTT GGCGCAGGCC TCGCCGGACT TACAGCCGCT
TACGAACTCA CAAAACTGGG CTATCAGTGT ACCCTGCTGG AAGCAAGGAA CAGGGCCGGA
GGCAGATGCT GGAGTATCCG GAAAGGAACC GTCCACCAGG AAACAGATAT CCCTCCGCAA
ACCGCCCGGT TTGACGAAGG CATGTACTTT AATGCCGGTC CCTCCCGTAT CCCGCATCAT
CATGAACTGA CCATGCACTA TTGTCGGGAA CTACAGGTAC CTATACAGGT GTACAATAAC
GTGAACGAGG CTACTTACCT CTTCGCCGAA GGCAAAGGCC CCCTTTCCAA TAAAAAGATC
AGGGCCCGGG AAATCCATAA TGACCTCCGT GGTTATACAA TGGAGCTCCT GGCTAAAGCG
GTTGATCAGC AAAAGATCGA TACGGCGCTT TCCAAAGAAG ATACCCGGAA AATACTGGAA
TACCTCCGGG CAGAAGGCGG CCTTGATATA GATAAACTTT ACAAGGCTTC CGACAGAAGA
GGTTTTGCCG AACAACCGGG CGCCGGAGAC AAACCCGGGA AAATAGGAGA TCCACATAAA
CTGGCGGATA TCATTTCCTC CGGACTCGCC GATCCCGACT TCTATAACGT GGCTGAGTAT
ACGTATGAAC TCCAGATGAC CATGTTCCAG GCCGTAGGTG GTATGGATAA TATCGCCAAA
GCATTTGAGC AACGACTGGG TAAGATGATC CGGTACGGCT GTGAAGTGAC GGATATCCTC
AATCAGCCGG AAGGAGTAAA GGTTCTTTAT AAGGATAAAA AAGGCGAAGG AGCCATACAG
GCAGACCTCT GTATCTGTAC CCTGCCACTC CCGGTATTAA GTAACATCAG GCATAATTTT
TCCTCCGATG TGAGCCGGGC GATTGACTAC GTCCCTTACA TGATTACCGG AAAGATCGGT
ATGCAGTTCA AGAGAAGGTT CTGGGAAGAA GATGAACAGA TCTTCGGAGG AATCACCCAT
ACAAATAACG AACTCACCCA GATCTTCTAT CCGTCTTACG ACTACCTCAG TAAAAAAGGC
ATTCTGCTGG GTTACTACAA TTTCCATGAT AAAGCAAAAC GGGTTGGGAA CATGACACAC
GCCGAAAGAG AAAAACTAGC CATGGAAAAA GGTAGTCTGA TACACCCCCA ATACCGGAAA
GAGTTTGAAT CTTCCTTTTC TGTGAGCTGG CATAAGACGC CTTACAGCAT GGGCGGATGG
GGCTTATATA CCGGCGCCAC CCGGCAAACG CATTATAAAA GTTTATTACA ACCTGACAAA
CAGGTATACT TCGCAGGTGA ACATACCACC TACCTCAATG CCTGGATGGC AGGTGCGTTC
GAATCGGCCA GAAGAACGGT AGCTGATATA CACGCACGCG TAACAGATCA ACGTATTTCC
TATCCCACTG CCACCGGCAG CTGA
 
Protein sequence
MSISRRAFLS QTGKVAAAYP AMLALGMLPP APAHAFALQG TGNGKRIVIL GAGLAGLTAA 
YELTKLGYQC TLLEARNRAG GRCWSIRKGT VHQETDIPPQ TARFDEGMYF NAGPSRIPHH
HELTMHYCRE LQVPIQVYNN VNEATYLFAE GKGPLSNKKI RAREIHNDLR GYTMELLAKA
VDQQKIDTAL SKEDTRKILE YLRAEGGLDI DKLYKASDRR GFAEQPGAGD KPGKIGDPHK
LADIISSGLA DPDFYNVAEY TYELQMTMFQ AVGGMDNIAK AFEQRLGKMI RYGCEVTDIL
NQPEGVKVLY KDKKGEGAIQ ADLCICTLPL PVLSNIRHNF SSDVSRAIDY VPYMITGKIG
MQFKRRFWEE DEQIFGGITH TNNELTQIFY PSYDYLSKKG ILLGYYNFHD KAKRVGNMTH
AEREKLAMEK GSLIHPQYRK EFESSFSVSW HKTPYSMGGW GLYTGATRQT HYKSLLQPDK
QVYFAGEHTT YLNAWMAGAF ESARRTVADI HARVTDQRIS YPTATGS