Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0073 |
Symbol | |
ID | 8356170 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 88100 |
End bp | 88777 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644962218 |
Product | NUDIX hydrolase |
Protein accession | YP_003119780 |
Protein GI | 256419127 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTCCT TTCACAGTTA TCAGAACCCC TCCCTCGCAG TGGACCTGGT CGTATTCGGT TATAGCAAAC AACAGCTTGC CGTCCTGCTG CTTAACAGGA AAGAAGAACC GTTTAAAGAC TGCTGGGTAC TGCCCGGAGC CTTCCTGCAA ATGGAAGAAC GCTTCCGTGA TACCTGTTCA AGGGTACTGA AAACCAAGCT AGGTATGGAT GATGTCTATA TGGAACAGCT GTACTCCTTT GACGAACCGG AACGTGATCC CCGTGGACGC GCCATTGCCG TCGCCTACTA TGCTCTGGTT AACCCCGCGC GTGTAGCCAT TTCAGCCGGC AATATGGCCA ATGACGTAGC CTGGTTTAAT ATCAAGGAAC TACCCAAACT GGGCTTCGAT CACCATGCCA TCTTTGAAAT CGCCCTGCAA CGGCTCCGTT CTAAGATTAC CTATTTCCCG GTAGGCTTCG AACTGCTGGA CGAATTGTTC ACCATGCCCG AGCTGCATGA ACTATATGAA TGTATCCTGG ATACCACGAT CGACCGCCGC AATTTCAGAA GGAAGATCAT GGACTCTGAA TACATTATTA ACACCGGGAA TAAACGGGAA GGTGCACAAA ACAGACATCC CGATCTGTAT AAATTCAATA AGAAGCTGAA AAAGAACAGC TTCCAGATAA ATGTATGA
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Protein sequence | MKSFHSYQNP SLAVDLVVFG YSKQQLAVLL LNRKEEPFKD CWVLPGAFLQ MEERFRDTCS RVLKTKLGMD DVYMEQLYSF DEPERDPRGR AIAVAYYALV NPARVAISAG NMANDVAWFN IKELPKLGFD HHAIFEIALQ RLRSKITYFP VGFELLDELF TMPELHELYE CILDTTIDRR NFRRKIMDSE YIINTGNKRE GAQNRHPDLY KFNKKLKKNS FQINV
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