Gene Cpin_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0070 
Symbol 
ID8356167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp86314 
End bp87147 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content47% 
IMG OID644962215 
Producthypothetical protein 
Protein accessionYP_003119777 
Protein GI256419124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAC ATCTATTGTT CGCAGGCGTA GCTGCGTTGG CTACCCTGTC GCTATTCTCC 
TGCAAAAAAG AACAGCAAAC TAATCCACAG TCATCTGATA ATTCCACGAC TGATGCCGGT
GGCAGGACGG CAGGTACAGA TGAACTGGAC GCTATCCTCA AAGACCTTTC TCCGGAAACC
TACCTGTTAG CCTGGGATGG TTTACCAGCA AACAATTACA TCACCAAAGC AACTTACGGC
AGTTTATCTG ACGAGACACA GTATTTCGGA CCTGGTGGTC GTCCGCCATT CCCTGAACTG
GCCAAGATCG GTTATGAAAG AATTCCGTTC AGAAAGATCT GGATCAAGAC CTGTCCTACT
ATGATCCCTT ACGAGGACAT CGCTAAACGC GTAGGTGCGC TGGCGCAGAA GGTGGATCCT
AAACAGCTCT TTGATCTGGG GATATATGAA GTAGGTAAAG GACAACAGTT GCTGGCTACC
AAAACTTTCC TGACAGCTGG ATCCCGTTTG TTGCCTGACG TGGTAGATCA AAAAGTGATC
GGTACCTCTT CCCTTTCCAA ATTCCGTTTA TCCATTCCCG CAGGTGCTTA TCCTTATTTT
ACCCGTGGTT TCTACGGTAC GGCAGATATT ACGCAATTCC CTGCCGGCGC CCGTGTAACT
GTTTACAATG GTCTGAAATG GGAGGATATC CTGAGAAAGA GATTTCCGAA TCTGATCGGT
TGCTTCGATC CTCAGATCTT AAAAGATATC CGTAGCAGGT TTGCAAGACT GGATCCAAGG
TTTGATAAAC TGGCTATTGA GGAAGTAGCT GGCGGTGCGG TGATTGGATT CTAA
 
Protein sequence
MRKHLLFAGV AALATLSLFS CKKEQQTNPQ SSDNSTTDAG GRTAGTDELD AILKDLSPET 
YLLAWDGLPA NNYITKATYG SLSDETQYFG PGGRPPFPEL AKIGYERIPF RKIWIKTCPT
MIPYEDIAKR VGALAQKVDP KQLFDLGIYE VGKGQQLLAT KTFLTAGSRL LPDVVDQKVI
GTSSLSKFRL SIPAGAYPYF TRGFYGTADI TQFPAGARVT VYNGLKWEDI LRKRFPNLIG
CFDPQILKDI RSRFARLDPR FDKLAIEEVA GGAVIGF