| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0066 |
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| Symbol | |
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| ID | 8356163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 82615 |
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| End bp | 83859 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644962211 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003119773 |
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| Protein GI | 256419120 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTG AGCAGTACCG TATTTCCGAG GAAATTAAGA GAAGTTTAGA AGAATTAGGC
TTTAAACGTC CTACGGATAT TCAATTTAAG GCGATCCCCT CCATACTGAA GGGTGACGAT
GTATTGGCCA TTGCACAGAC AGGAACGGGT AAAACAGCTG CTTTTGCTAT TCCTGTGTTG
CATAAGCTGC AACAATACCA TCCCCGGAAG ACCAAGGGAG AGGTTCGCTG TGTGGTAATG
GTACCTACCA GGGAACTGGC TGTTCAGATC TCAGAAGTGT TTGAAAGGCT TGCAAAATAT
ACCAAACTCA ATATACTGGG CTTACATGGT GGTGTGGACC AGGCGCCGCA GCTGAAAAAG
CTGGCGCAGG GGGTAGACGT GCTGATTGCA ACGCCGGGTC GTATGTTTGA CCTGATCAGT
CAGGGCTTTA TTGACCTGAG TCAGACCGGC ATCCTGATCC TGGATGAAGC GGATCATATG
CTGGACCTTG GGTTTATCAG GGATATCCGG GATGTATTGA AGCATCTGCC AAGGAGACAC
CAAACACTCT TCTTCTCAGC GACGATCGAC GAGGATATTA AAGACCTGGC TTATTCTGTG
GTAAATAACC CGATCAGGAT CCAGATCTCT CCGCAGGACC CGGTGTCTAA GAATGTACAG
CACGCGGTGG CCTATGTGGG TATGGATGAC AAACGTTTTT TCCTGGAAAG ACTGGTGAAG
GAATTCCCGG AGAATAAGAT CCTGGTATTC GTACGTACGA AGGTGCGTGC GGAACGTGTG
GCTGCTGCTA TGGAGCGTGT GGGTATTAAA TCCCTGACGA TGCATGGCGG GAAAGAGCAG
GATAACCGTT TGCAGGTGAT GGACGAGTTT AAGAAGGGCG ATATCAAACT GTTGATTACC
ACCGATGTGA ATGCACGAGG TATAGATATC CCGGATGTGG AGTATGTGGT GAATTATGAC
CTGCCGGATG TGCCGGAGAA CTATGTACAC CGTGTAGGAC GTACAGGCAG AGGCGTAAAG
AAGGGGCAGG CTGTTTCTTT CTGTAGCGAC GAGGAAAAGC CGGTATTAGA TGCTATCCAG
CAATACCTTG GTAAGGAGAT TACGGTGATG AAGATCGATA AGAATGATTA CCGGGAGACG
ATCAGTTTCT CAGAAGATAT CCCGAATGAT AACTGGCAGC TGTTGCTGGA CGAGCACAAC
AAACAGCAGG AGTTGCTGAA GAAGAAGAAA AAGAAAAAGA AGTAA
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| Protein sequence | MKFEQYRISE EIKRSLEELG FKRPTDIQFK AIPSILKGDD VLAIAQTGTG KTAAFAIPVL
HKLQQYHPRK TKGEVRCVVM VPTRELAVQI SEVFERLAKY TKLNILGLHG GVDQAPQLKK
LAQGVDVLIA TPGRMFDLIS QGFIDLSQTG ILILDEADHM LDLGFIRDIR DVLKHLPRRH
QTLFFSATID EDIKDLAYSV VNNPIRIQIS PQDPVSKNVQ HAVAYVGMDD KRFFLERLVK
EFPENKILVF VRTKVRAERV AAAMERVGIK SLTMHGGKEQ DNRLQVMDEF KKGDIKLLIT
TDVNARGIDI PDVEYVVNYD LPDVPENYVH RVGRTGRGVK KGQAVSFCSD EEKPVLDAIQ
QYLGKEITVM KIDKNDYRET ISFSEDIPND NWQLLLDEHN KQQELLKKKK KKKK
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