| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0061 |
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| Symbol | |
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| ID | 8356158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 74590 |
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| End bp | 77295 |
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| Gene Length | 2706 bp |
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| Protein Length | 901 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644962206 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003119768 |
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| Protein GI | 256419115 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAA ATTATTGTTA TGCATATCCC CTAAGATGGG TATGTGAACC TCAATATCAG
TTCCCGATGA AGAGAATGTA TGCTGCAGTG GTCGCCATTG CATTTTGCTG CGCGGCAAAT
GATAATAGTT ATGCGCAGGC AAACCCCGAT AATGCTACCT GGAAAATGCA ACCAGTAAGC
ATCCAAACCA GGTGGGCGAA GAATGTCACC CCCCAGAATG TATTGCCAGA GTACCCACGT
CCCCAGATGG TGAGAAGTGA GTGGCAGAAC CTGAATGGAC TGTGGGAGTA TGCCATTACA
GGCAAAGATG CTGCAAAGCC TGCTCAATTC GACGGACAGA TATTAGTGCC ATTCCCTATT
GAATCAGCCT TATCTGGTGT ACAGAAGCCT TTATTACCAA CGCAAAGACT TTGGTATAAA
CGTAGTATCA GTAAACCTGA TGTAACAGTT GGCAAACGTG TGCTGCTTCA TTTTGGTGCT
GTGGATTGGG ATGCAAAAGT CTACTTGAAT GGTAAAGAAG TCGGTGGACA TACTGGCGGC
TATCAGAACT TCTCTTTTGA TATTACGGAT GCTTTGAAGG ACGGTACAAA CCAGCTGGAA
GTCGCTGTAT TCGACCCTAC AGATCAGGGT ATTAACCCTC ATGGAAAGCA GGTGTTAAAC
CCACAGAATA TAATGTATAC AGCCAGTAGC GGTATCTGGC AGACGGTTTG GATGGAGACT
GTCCCTTCCG CTTATATTAA TAACATTCGC CTTACACCGG ATATTGATAA AGGTAGCCTG
AAGTTGGAAG TACTGACTGC TGGAAAGACG GGCGATTATA CTGTTGAGGC TATTGCTTCG
AATGGTAAAA GGGTGAAAGG CAAACCAAAT GCAGAGCTGT TATTACCAGT CCCAGACGCA
AAGCTGTGGA GTCCAGATCA ACCCAATTTA TACAATCTGA ATGTAAAACT GTTGTATAAA
GGAAAGGTTG TAGATACAAT AGGCAGCTAC TTTGGAATGC GCAAGATTGA AGTAAAGAAG
GACGAGAAAG GTGTTGATCG CCTGTTCCTG AATAACAAGT ACACTTATCA CTTAGGAGTT
TTAGATCAGG GTTTCTGGCC AGAAGGTTTA TATACGGCTC CAACTGATGA TGCCTTACAA
TTTGATATTA TGGCTATCAG GAACATGGGG TATAATACCA TTCGTAAGCA TATTAAACTG
GAGCCTGCAC GTTGGTATTA TCATGCGGAT AAAGCTGGTA TGCTGGTATG GCAGGATATG
GTGACTTGTG CGAATGATAA GCCTGAGGCG AAAGCTGCAT TCGAAAAAGA AAACAAAGAG
AATATTGCGC AGTTATATAA CTATCCAAGT ATTGTTATTT GGGTGCTGTT TAATGAAGGG
TGGGCGCGTT ATGACCAGAA GCGCTTGACA GAGTGGATGA AGAAAGAAGA TCCATCTCGC
ATTGTAAATG GACATACTGG TGAGAACTAT GACCGAGATG CACCACAGGA CGTATCTCAG
AAATGGGCGA GTAGTGACTT GACTGATATT CATGATTATC CGGGACCTGG TATTCCGCCA
GCCTTACCTG GTAAGGCGCG AGTACTTGGA GAATGGGGAG GTGTAAGAGT ACCTACGTTG
AAACATCAAT GGAACGATAT GGAAGGATGG GGCTACATTC AGGTACCTGC ATCGGCATTT
AAAATGAAAT ATGATTCCCT GATCAAAAAC TTAAAAAAGT TTGAAGAACA GGGGCTTTCT
GGATCAATTT ATACAGAACC ATTTGATGTA GAAACCGAAG AGAATGGCAT GATGACATAT
GACCGAGAAG TGATCAAAGT CGCACCTGAG GAGCTAAGAA ATATACACGG TCAAATATTG
GCCCAGGCGA AAAACTATGC AGCTACTATT GGGGTGTTTC AGGCAAAAAT TGCAGATACC
GCAAATCCTG ATTTACAATA TGCGACACTT CTCGAACAAT TTAAAAATGG CAAAAAAGAT
TCTGCATTCT TAAGAGACCT AACATTAATG GCAGTTCGTT TAAAAGACGA CATAAACATG
TATAAACTTT GCAATACTTA TCTATCTCAA CTTTCAGAGC CAATGACATT AAACACACTC
ACATTTATTG ACCGGTTTAC ATTTTCAATA AATGATGTAG GATTTAATAT TATACAAAAA
AATAAAGAGA AAGCCATAGA AATTCTCGGA TACAAAAAGG TAAACGACAT ATTAAAATCA
TGCATTTTTG AAGACGAAAT AAAGCCTTAT GTGTCAGACA TCAAAATAAA TCCAGATTGG
AATGTCTTAG AAAAAAAACT AGTCAATAAA TATAATGCTC CTGGGGAGGA AATACTACTA
ACAGCGAAAT CTACACATAT GTTAAATCGA AAGGACTGGC CGAATTTTGT AGCTTCCACA
TCTGCTCTGG TAAATAAATA TGGACAAAAC ATGTCTACCA CTACTTTAAA CAACTATGCC
TGGACAATTT TTGAGAATGT TTCTGACACA AGTCTGCTGA AAGAAGCACT AGTATGGAGT
AGAGCTAGTC TTCAAGATGA GATCAGCCCT GATAAATATG ACACTTATGC TAACTTGTTA
CATAAGATAG GGCGCCAAAA GGAAGCGGTT GAATGGGAAC AAAAAGCAGT TGACATGCAA
CCTGGCCCCA ACGTGTTCAC TCAAACCCTC GAAAAAATGA AACGCGGTGA AAAAACCTGG
AACTAG
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| Protein sequence | MALNYCYAYP LRWVCEPQYQ FPMKRMYAAV VAIAFCCAAN DNSYAQANPD NATWKMQPVS
IQTRWAKNVT PQNVLPEYPR PQMVRSEWQN LNGLWEYAIT GKDAAKPAQF DGQILVPFPI
ESALSGVQKP LLPTQRLWYK RSISKPDVTV GKRVLLHFGA VDWDAKVYLN GKEVGGHTGG
YQNFSFDITD ALKDGTNQLE VAVFDPTDQG INPHGKQVLN PQNIMYTASS GIWQTVWMET
VPSAYINNIR LTPDIDKGSL KLEVLTAGKT GDYTVEAIAS NGKRVKGKPN AELLLPVPDA
KLWSPDQPNL YNLNVKLLYK GKVVDTIGSY FGMRKIEVKK DEKGVDRLFL NNKYTYHLGV
LDQGFWPEGL YTAPTDDALQ FDIMAIRNMG YNTIRKHIKL EPARWYYHAD KAGMLVWQDM
VTCANDKPEA KAAFEKENKE NIAQLYNYPS IVIWVLFNEG WARYDQKRLT EWMKKEDPSR
IVNGHTGENY DRDAPQDVSQ KWASSDLTDI HDYPGPGIPP ALPGKARVLG EWGGVRVPTL
KHQWNDMEGW GYIQVPASAF KMKYDSLIKN LKKFEEQGLS GSIYTEPFDV ETEENGMMTY
DREVIKVAPE ELRNIHGQIL AQAKNYAATI GVFQAKIADT ANPDLQYATL LEQFKNGKKD
SAFLRDLTLM AVRLKDDINM YKLCNTYLSQ LSEPMTLNTL TFIDRFTFSI NDVGFNIIQK
NKEKAIEILG YKKVNDILKS CIFEDEIKPY VSDIKINPDW NVLEKKLVNK YNAPGEEILL
TAKSTHMLNR KDWPNFVAST SALVNKYGQN MSTTTLNNYA WTIFENVSDT SLLKEALVWS
RASLQDEISP DKYDTYANLL HKIGRQKEAV EWEQKAVDMQ PGPNVFTQTL EKMKRGEKTW
N
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