| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0044 |
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| Symbol | |
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| ID | 8356141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 54437 |
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| End bp | 54988 |
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| Gene Length | 552 bp |
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| Protein Length | 183 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644962189 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119751 |
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| Protein GI | 256419098 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATGCAC TAGACGGTTA CAGCGATGAA CATCTCTTCA CCCTCCTGCA GGATGACAAT
GAAATCGCCT TCAACACTAT ATTCGGCCGT TACAGCCGTC GCTTATACAT TGAAGCATAT
AGTAAGCTAC AAGATGAAGA TGAAGGCAAT GACATTGTCC AGGAAGTCTT TTGTTGGCTG
TGGGATAAAC GCCGTGTGCT GGATACACCA CAATGTCTGA AGGCTTATCT GATACAGGTA
GTCAGGAATA AATGTGTCGA CCTGATCCGT AAAAAGACCA GTACCAGGGG GAAAAAGCAA
CAATACATAT GGCTGGCGGA TACCTATACT ACCACCTCGC CTATAGAAAC AAAAGAACTA
GGCAGGCAAT TGGCCATTGC TATTGACAGC ATCACACCTG CCAGCAGACT GGCTTTTGAA
CAGTTGTATC TCCACAAAAA AAGCCTGAAA GAAATCGCAG ACCAGATGGA GATTAACGTT
CAGTCGGTAA AAAACCACAT CCACCGCGCG TTGAAAGTCC TACGTGAAAA TCTGAAACAC
AGCTTATCAT AA
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| Protein sequence | MHALDGYSDE HLFTLLQDDN EIAFNTIFGR YSRRLYIEAY SKLQDEDEGN DIVQEVFCWL
WDKRRVLDTP QCLKAYLIQV VRNKCVDLIR KKTSTRGKKQ QYIWLADTYT TTSPIETKEL
GRQLAIAIDS ITPASRLAFE QLYLHKKSLK EIADQMEINV QSVKNHIHRA LKVLRENLKH
SLS
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