| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0042 |
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| Symbol | |
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| ID | 8356139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 49354 |
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| End bp | 50772 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644962187 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003119749 |
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| Protein GI | 256419096 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA TAGTTAAGAT ACTTTGCATT GCTATTTTAT GTCTATTTAT TTGTGCATGT
ACTAAATTTT TGGATGTTGG AGATCCGCCT GATAAAGTAG CCGCCAATTT TGTATATTCA
TCTAATAGTG GAGCAGCAGG AGTATTGACA GGTGTTTTTT TTGATCTACA AAGGCAAGGA
GAAGGATTTG CACAAGGAAG AACAGGAATA TCTTTATTTT GTGGACTGGC TGCAGACGAA
TTTAATGCTT TGCCAATTAG CTCATTTAAT GATATGTATA CCAATACATA TCCGTATGAT
TTTTGGTCGG TATATTACAA GTTTATTTAT CGTATTAATA TCGCGCTGGA GGCTATTGGA
TTTTCCGAAA AATTGTCTCC TGATGTTAAA AAACATCTTC TAGGGGAAGC GTATTTCTTA
CGTGGATTTA TTTATTTTTA TTTAGTGAAC ATGTATGGAG ATGTACCTTT ACTTCTCACT
GGAGATTATA AGTTAAATAG TAAAGCGGCA CGTGTAGATA GAAATAAAGT ATATGACCAA
ATCATTAAGG ATCTTCTTGA TGCAGAGACT TTTTTAAGCA GTAATTATTT GGAAGCTAAT
GTCAGAAATA TTAGTATTGA TCGAGTTCGA CCTAACAAAT TTAGCGCAAA AGCCATGCTT
GCTAGAGTTT ATTTGTATAA GCAAGATTGG ATAAATGCTG AATTAAAATC TACTGAAGTA
CTAAGCCAAA AATCTTATTA TGATACAGTA GCTTTAAATG AGGTATTTGC TAAGAATAGT
AAAGAATCTA TATGGCAGCT TCAACCGGTG TCAGATGGAA TTCGATTGAA TACATTAGAT
GCTGAAATGT TCACTTTGAT AAATGGTAAA CCAGATCAGT ATTTTAATCC TGTTTGGGTA
AGTGATTTCT TAAATCACGC ATTTGAAATA GATGATCAAA GAAAGAATAA ATGGCTAGGA
ATTGCCCAAG ATACATCGAC AAAGACAGAA TATTTGTATA TATCAAAATA TAAGTATTAC
AGTAGAAATG ATGTATCCAA AGAGTACTTG ACTGTTCTAA GAGTCGCAGA ACAATATCTT
ATAAGAGCGG AGTCAAGGGT GCATTTAAAT AAATTGTCAC AAGCAAAAGC CGATCTGGAT
ATTATTCGTA TTAGAGCTGG CCTTAAAGAA ATACAACTAG GTTCAACAGA TAGGTTATTA
AATCAGATTT ATCATGAGCG ACAAGTTGAG CTTTTCGCTG AATGGGGGCA TCGTTGGTTT
GATCTGAAAA GAATAGGTGA AATCGATCAA GTAATGACTG GCGTCTCACC TCATAAAGGA
GGTACTTGGG TTTCTTATAA ACAGCTTTTC CCAATTCCAT TATATGACTT GCGATACAAT
GTTAACCTCA TTCAAAATGC TGGTTATCCT TCAAACTAA
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| Protein sequence | MNNIVKILCI AILCLFICAC TKFLDVGDPP DKVAANFVYS SNSGAAGVLT GVFFDLQRQG
EGFAQGRTGI SLFCGLAADE FNALPISSFN DMYTNTYPYD FWSVYYKFIY RINIALEAIG
FSEKLSPDVK KHLLGEAYFL RGFIYFYLVN MYGDVPLLLT GDYKLNSKAA RVDRNKVYDQ
IIKDLLDAET FLSSNYLEAN VRNISIDRVR PNKFSAKAML ARVYLYKQDW INAELKSTEV
LSQKSYYDTV ALNEVFAKNS KESIWQLQPV SDGIRLNTLD AEMFTLINGK PDQYFNPVWV
SDFLNHAFEI DDQRKNKWLG IAQDTSTKTE YLYISKYKYY SRNDVSKEYL TVLRVAEQYL
IRAESRVHLN KLSQAKADLD IIRIRAGLKE IQLGSTDRLL NQIYHERQVE LFAEWGHRWF
DLKRIGEIDQ VMTGVSPHKG GTWVSYKQLF PIPLYDLRYN VNLIQNAGYP SN
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