Gene Cpin_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_0007 
Symbol 
ID8356104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp10958 
End bp11773 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content36% 
IMG OID644962155 
Producthypothetical protein 
Protein accessionYP_003119717 
Protein GI256419064 
COG category[S] Function unknown 
COG ID[COG4849] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGTA AGTTCTTTAA TGAAGGGGTA TTGGAGATGT TAACGGCGCT GCAGGAAGTA 
TTGAAAAAAC TTAATATAGA CTTTTATCTC GTTGGTGCAT TAGCCAGGGA CATTAGCTTA
TCGCATGATC CCAATTTCGC ACCTAAAAGA AAAACTAATG ATGTCGATAT TGCAATTCTT
CTGGCAACCG AAGAGCAATT CTATCAGGTG AAAAATACCT TACTTGAATC TGGAGACTTC
ACAGCACATG AAACGGAAGC TGTTAAATTA TTCTATAAAA ATATTATTGA ATTAGATTTA
TTACCATTTG GTGATATTGA AAATGAGAAC AGGGAAACTA AAATAGGGCA ACCGAGATTG
TTCATAATAG ATGTACCTGG TTTTATGGAG GTATTTCCTG AGGCTGAAAC TTATTCACTA
GGTGAAGGTA CGACGCTAAA GGTGTGCCCA ATTGAAGGAC TGGTATTGCT GAAGTTAATT
GCAAATGACG ACAGGCCAGG TAGAATAAAA GATATAGGTG ATATAGAACA CATAATTTCT
GTATACTTTG ATTTGAAGAC AATAGAGATT TACGAGGAGT ATTTAGAAGT TATGGATCTT
TATGAGGCAC ATGATCGCGA ATATTTGAAA TTAGTTAGTT CTCGCATTAT AGGGCGAAAA
ATAGCTGGTA TGCTTGTTGG CTCACCTCAA TTAGGTGATC GGGTCATTGG TGTTCTTGAG
AAAAGGAAAA GTGGATTGTA TTGGTTAGAA ATATTGGAAG GCATAAAAGA AGAACGTGAG
AGAATTAATT CAAAAGCCGT TTCCGTATCA TTATAA
 
Protein sequence
MESKFFNEGV LEMLTALQEV LKKLNIDFYL VGALARDISL SHDPNFAPKR KTNDVDIAIL 
LATEEQFYQV KNTLLESGDF TAHETEAVKL FYKNIIELDL LPFGDIENEN RETKIGQPRL
FIIDVPGFME VFPEAETYSL GEGTTLKVCP IEGLVLLKLI ANDDRPGRIK DIGDIEHIIS
VYFDLKTIEI YEEYLEVMDL YEAHDREYLK LVSSRIIGRK IAGMLVGSPQ LGDRVIGVLE
KRKSGLYWLE ILEGIKEERE RINSKAVSVS L