Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_0007 |
Symbol | |
ID | 8356104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 10958 |
End bp | 11773 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644962155 |
Product | hypothetical protein |
Protein accession | YP_003119717 |
Protein GI | 256419064 |
COG category | [S] Function unknown |
COG ID | [COG4849] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAGTA AGTTCTTTAA TGAAGGGGTA TTGGAGATGT TAACGGCGCT GCAGGAAGTA TTGAAAAAAC TTAATATAGA CTTTTATCTC GTTGGTGCAT TAGCCAGGGA CATTAGCTTA TCGCATGATC CCAATTTCGC ACCTAAAAGA AAAACTAATG ATGTCGATAT TGCAATTCTT CTGGCAACCG AAGAGCAATT CTATCAGGTG AAAAATACCT TACTTGAATC TGGAGACTTC ACAGCACATG AAACGGAAGC TGTTAAATTA TTCTATAAAA ATATTATTGA ATTAGATTTA TTACCATTTG GTGATATTGA AAATGAGAAC AGGGAAACTA AAATAGGGCA ACCGAGATTG TTCATAATAG ATGTACCTGG TTTTATGGAG GTATTTCCTG AGGCTGAAAC TTATTCACTA GGTGAAGGTA CGACGCTAAA GGTGTGCCCA ATTGAAGGAC TGGTATTGCT GAAGTTAATT GCAAATGACG ACAGGCCAGG TAGAATAAAA GATATAGGTG ATATAGAACA CATAATTTCT GTATACTTTG ATTTGAAGAC AATAGAGATT TACGAGGAGT ATTTAGAAGT TATGGATCTT TATGAGGCAC ATGATCGCGA ATATTTGAAA TTAGTTAGTT CTCGCATTAT AGGGCGAAAA ATAGCTGGTA TGCTTGTTGG CTCACCTCAA TTAGGTGATC GGGTCATTGG TGTTCTTGAG AAAAGGAAAA GTGGATTGTA TTGGTTAGAA ATATTGGAAG GCATAAAAGA AGAACGTGAG AGAATTAATT CAAAAGCCGT TTCCGTATCA TTATAA
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Protein sequence | MESKFFNEGV LEMLTALQEV LKKLNIDFYL VGALARDISL SHDPNFAPKR KTNDVDIAIL LATEEQFYQV KNTLLESGDF TAHETEAVKL FYKNIIELDL LPFGDIENEN RETKIGQPRL FIIDVPGFME VFPEAETYSL GEGTTLKVCP IEGLVLLKLI ANDDRPGRIK DIGDIEHIIS VYFDLKTIEI YEEYLEVMDL YEAHDREYLK LVSSRIIGRK IAGMLVGSPQ LGDRVIGVLE KRKSGLYWLE ILEGIKEERE RINSKAVSVS L
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