| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0005 |
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| Symbol | |
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| ID | 8356102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7325 |
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| End bp | 8839 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962153 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003119715 |
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| Protein GI | 256419062 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAC TCATAAAAAA TATCACCCTC TCCCTGGCGG GTATTTCCCT GCTGGCGGCT
TGTAACAAAA AGCTGGATAT TACACCGGAA GGTGCGCCTA CCTCCGGTAA CTTCTGGCAG
ACGGAAACCG ATGCCATCTC CGGCGCTAAC GCCATGTATA ACCTGTTTGA CGATGAAAAC
TTCTATGGCC GCGGCTACTG GTGGTTTATC AACGCCAGCG ATGATATGGT GACTGGTCGT
GTAAAAGCAG AAGGCGATAA CATCAAAAAC TTCAACAGCA ACTTTATCGG TGGTTCCTAT
ACGGAAGGAC AATGGAAAAT GAGATATATC GTGATCAAAC GTGCAAACGA TGTGATCATG
CATGTACCTT CCATTCCAAT GGACGCGAAA CTGAAAAACC GTCTCCTGGG TGAAGCGTAC
TTCCTCAGCG GTCTGATGTA CTACGAACTG GCTTATACTT ATGGTGATGC CCGTGCCGGT
GTACCTATCG TAAAACGTGA CAGCTTAACC GGCGACAAAC CAATTCCCCG TTCTGCTAAC
GTAAACCTCG TATATGACTA CGTTGAACAG GAACTGAAAC AGGCCGCTGC ATTGCTGCCT
TATTTCGACA CCTATTCTGC TGATATTTAT GGCCGTCCGC ACAAAACAGC TGCTTTCGCA
TTCCTGAGCA AAATGTTCCT GTACAAAAAG GACTATGCCA ATGCAGAAAG ATATGCTGAC
TCTGTAATAT TGAGTGGTAA ACACAAACTG CTGGATAAAT TTGCAGACGT ATTCACCATT
GCTAACAACT GGAGCAGTGA ATATATCTGG TCTGTATACT CCAATTCACA AGGCCCGAGC
GGTTGGGGCA GCATCCTGCC AGGTGTAATG CTGGAGAACA AAGGCTGGGG TAAATATAAT
GGCTGGGGAT ATTATATGCC TACCAAAGAA CTGTATGACT CTTATGAAGA AGGCGATATC
AGAAGAGAAG CGACTATCCT GAAACCAGGT GATCACGTTA CCTTCTACGG AGAAGACATC
ACCTATTCTT CAACAAACAG TCTGTCAGGC TACCAGTTCC GTAAATACAT GGAACCATTC
TCTTATCCTG CCGGCCAGCA CCTGAGCCCT AACGGAGACC ATCCTACTAC TGACCTGAAC
CTGCCACTGC TGCGTTATGC AGAAGTATTG CTGATCAAAG CGGAAGCTGA AATCATGCAG
GGTAAAAATG CAGATAAGGA AATCAATATG ATCAGACATC GTGCTGGTCT GAAAGATGTA
ACCGGCGCTA CACTGGCTGA ACTGAAAAAA CAACGTCGTG CAGAACTGGC AGGCGAATGG
GCGAACCATC ACTTCGACCT GGTACGCTGG GGAGATGCAC AGGCCGCCTA CGCTAAACCA
TTACACGGTG TTAACGGCAA TGAGATCTGG CCTGCACGTA CCTTCAACCC TGCTATTCAC
AACGTATGGC CTGTGCCAAG AAGTGAAGTG ACCAGTAGCG GTGGAGTAGT AAAACAGAAT
GGCGGCTGGG AATAG
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| Protein sequence | MKQLIKNITL SLAGISLLAA CNKKLDITPE GAPTSGNFWQ TETDAISGAN AMYNLFDDEN
FYGRGYWWFI NASDDMVTGR VKAEGDNIKN FNSNFIGGSY TEGQWKMRYI VIKRANDVIM
HVPSIPMDAK LKNRLLGEAY FLSGLMYYEL AYTYGDARAG VPIVKRDSLT GDKPIPRSAN
VNLVYDYVEQ ELKQAAALLP YFDTYSADIY GRPHKTAAFA FLSKMFLYKK DYANAERYAD
SVILSGKHKL LDKFADVFTI ANNWSSEYIW SVYSNSQGPS GWGSILPGVM LENKGWGKYN
GWGYYMPTKE LYDSYEEGDI RREATILKPG DHVTFYGEDI TYSSTNSLSG YQFRKYMEPF
SYPAGQHLSP NGDHPTTDLN LPLLRYAEVL LIKAEAEIMQ GKNADKEINM IRHRAGLKDV
TGATLAELKK QRRAELAGEW ANHHFDLVRW GDAQAAYAKP LHGVNGNEIW PARTFNPAIH
NVWPVPRSEV TSSGGVVKQN GGWE
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