| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_0004 |
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| Symbol | |
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| ID | 8356101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 3910 |
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| End bp | 7302 |
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| Gene Length | 3393 bp |
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| Protein Length | 1130 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644962152 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003119714 |
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| Protein GI | 256419061 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.138653 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAG ACAAACTACA TTTCTCTTCA CGGCTTCGCT CAGTATTCCT CACGGGACTG
TCGATGCTCG TGCTGGCATC TACCGCCTTT GCCCTGCCAA CAGGTTCTCA GGCATTACAG
AAAGTCCTCC AGCGTTTCCA GGTGAAACAA GGTAGCCTGT CCGCTGCCCT GAAACAACTG
GAATCTACTG CGCAGATCAG CCTCGCCTAT GACGAAGCTG CCCTCCGGAA AATGCAGGTA
CACGCAGAGA CTTATCAGAA AAAATCTGTT ATCAGTATCC TCCAGGATCT GTTAAGTCAA
TCCTCTCTGA AATTTGAAGA AAAATATAAT ACCGTATTAA TCTATGATAG CGCTGATGCT
CCGACTATCA GTATTGCAGC ACAGCAGGCG CAGGAAAAAG TAACCCTGAT CGGTGCCGTA
TCTGATAAGA ACGGTCCCTT GATCGGTGCT ACTGTGATGG TAAAAGGAAC CACTAACGGT
ACGGGTACAG ATGCAGCTGG TCAGTTCAAA CTGTCAGTAG CTCAACCCGT AAATAACCTG
GTACTGGTCG TAAGCATGAT CGGTTTTAAA ACACAGGAAA TCGTTGTTGG CAATCAGCAC
AGCTTTCAGA TTGTACTGGT TGAAAACAGT CTGAACCTGA ACCAGCTGGT AGTAGTAGGT
TATGGTACAC AGCGTAAAAG CACCGTATCA GGCGCTATCG CTGATGTACA ACTGGATAAA
CTGAACTCCC GTTCCCTGGG TGATGCAAAC GAGGCTTTAC AGGGTAAAGC TCCGGGCGTA
ACCGTTCAGA ACAACGGTGG TGATCCAACC TCTTCTCCCA AAGTATACAT CCGTGGTATG
GGTGGTATCA ACGGTGAATC TGCCCTGACA ATCGTGGATG GTTCCATCTA CACAGGCGGT
CCGATCAACC CGAATGATAT CGAATCTATC AACGTACTGA AAGATGCGGC TGCCGCTATC
TATGGAGCAA GAGCTTCCGG TGGTGTTATC CTCATCACTA CTAAGAAAGG TAAAGAAGGT
GCTGCAAGCG TATCCCTAGA TGCTAAAATG GGCTGGCAGT ATGCGGCTAA GAAACTGGAT
GTACTCACTG CAAAACAGTT CGCTGATGTA GAAAACATCG CTTATGCTGC TGCTGGTACG
CCACTCGCTG ACGCATTCAA TGCTACTAAA TACCCTGATG GTCAGATCAC CCGTACTGAC
TGGCAGGACG AGATCTTCCG TACCGGTAAG ATCAACGATT ATAACGTGAA CGTAAAAGGT
GGTACCGATA AAGGTAGATA TTACATGGGC TTCGGTTACC GTCGTAATGA AGGTATCCTC
CTGAATACAC AGGCAGAACG TTATACCTTC CGCATGAACT CTGATGCAAT GGTAAAACCA
TGGCTGAAAG TAGGTGAGAA CCTGTCCTTC ACCTATACAA ACGGTAACGG TGCTAACACC
ACCAGCCCTT ATACTGGTGC GATCTTCACT GCTTTGGGTT ACCCTCGTCA TATCGCTCCA
CGTACACCTA CCGGTGCATT CAGCGGTATG CCTGTTGATT ACGCTGGTTC TTATGGCGAC
CTGGCAAACC CGGTTGCAAT CCTGGAAAGA ATGGATAACA AAACGCCGAC TACCAACATC
AACATCAACC CATATGCTGA GATCTATTTC ACCAGGGATC TCGTGTTCCG TTCCAACTTT
GCTTTCACCA GATCACTGAC TGACCAGAAA TCATTCTCTA CACGTGCATT GGAGATCGGT
AAGATCAACA CCAGCAACGG CCTGTCTGAA TCAGTAAACA ATGGTACCAA CCTGCTGGCT
GAACAGACCC TGACTTACAC CAAAACTTTC AACGGCGTAC ACAACGTTAA TGCAGTAGCT
GGTTATACTT ATCAGCACGA TGATTACACC TACCTCTTTG TATCTGCCAG CAACTTCGGT
GATGAAAGAG ATGTATACCG TTACTTCGAT AACGCCGGTA CCTGGGCAAA ACCATCCAGC
GGCAGATCAC AGACCGCTGT AGAATCATTC CTGGGTCGTG TGAACTATGA CTACAAAAGC
AAATACCTGT TCACCATACT GGGCCGTCGT GATGGTAGCT CGCTCGTAGC GCCACAGAAC
CGATATCAGA ACTACTACTC TGTATCCGGT GGTTGGGTAC TGACACAGGA AGATTTCATT
CCTAACAGCT CCGTACTGAG CTTCGCTAAA GTACGTGCAA GCTATGGTGT ACTGGGTAAC
CTGGGTAGCT TACCGGCTAA CGCCATCAAC ATTAACCTGA AATCAGTGAA TATCTACACT
GGTGCAAATG GTACCCAGAC AACCGGCCTC GCTGAAGACG CACTGTCTAA CCCGAACCTG
ACATGGGCTG ATTCCCGCCA GATCAACTTC GGTACCGACC TCGCTTTCTT CAAAAACAGC
CTGTCCCTTA CCGCTGACTA CTTCATCAAA ACTACCGAGA ACATGATCCT GCAGGTAGAC
CCGCCAAGTA CTGCAGGTGT TAGCACCGGT ATGTATAAAA ACATGGGTAA AGCCCGCGAT
AACGGTATCG AACTTGGTAT CAACTATAAC GGTCGTGCAG GTAAAGAATT CACTTATGGC
ATCGGTGCTA CATTGACCAA AGTGAATAAC AAACTGCTGG AACTGGAAGA TGGCAGAAAC
GAAGTAGTAT CTTCTTCTAA TATCAACGTA CGTAGTACGC TGAACCCGAT CGTAACCCGC
GTAGGCAACC AGATCTATGC ATATAACGTG ATCAAGACTG CCGGTATCTT CCAGACACAG
GCAGAGGTTG ACAACTATAA AAACAAAGAT GGTCAGCTGA TCCAGCCAAA CGCAAAACCA
GGTGATCGCA AATTCGTCGA TAAAGATGGT AACGGCACCA TCAACAACAA CGACAGAGAA
ATCGTAGGAA GCCCGTTCCC TTCTTTCTCT TATGGTCTGA GTCTGAATGC TGCTTACAAA
GGATTTGATC TGAACGTATT CGCACAGGGC GTACAGGGCA ACAAACTGTT CAACGCACTG
AAATACACCA ACATGAACGC CAGCATCGGT ACTAACTACA ATATGCTGAC CGGTATCCTG
GATGCATGGA CGCCAACACA CACCAACACA GATGTAACAC GTATCATCTC TACCGATAAA
AACGGCAACT ACGGTAACAC ATCTGACTGG TATATCGAAA ACGGTTCTTA CCTGCGTATC
AAAAACATCA CCCTGGGTTA TACACTGCCT GCGCTGCTGA GCAACCGTGC ACATGTAGGT
GCTGTAAGAC TGTACTTAAC AGCGACCAAC CTGTTCACCA TCACCAAATA CAAAGGATAC
GATCCTGAAG TAGGTATGGA CGAATTAGGT ATCGATAAAG GCCGTTACCC ACAGGCTAAG
AATGTTCTGA TTGGTCTGAA CGTTAATTTC TAA
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| Protein sequence | MQKDKLHFSS RLRSVFLTGL SMLVLASTAF ALPTGSQALQ KVLQRFQVKQ GSLSAALKQL
ESTAQISLAY DEAALRKMQV HAETYQKKSV ISILQDLLSQ SSLKFEEKYN TVLIYDSADA
PTISIAAQQA QEKVTLIGAV SDKNGPLIGA TVMVKGTTNG TGTDAAGQFK LSVAQPVNNL
VLVVSMIGFK TQEIVVGNQH SFQIVLVENS LNLNQLVVVG YGTQRKSTVS GAIADVQLDK
LNSRSLGDAN EALQGKAPGV TVQNNGGDPT SSPKVYIRGM GGINGESALT IVDGSIYTGG
PINPNDIESI NVLKDAAAAI YGARASGGVI LITTKKGKEG AASVSLDAKM GWQYAAKKLD
VLTAKQFADV ENIAYAAAGT PLADAFNATK YPDGQITRTD WQDEIFRTGK INDYNVNVKG
GTDKGRYYMG FGYRRNEGIL LNTQAERYTF RMNSDAMVKP WLKVGENLSF TYTNGNGANT
TSPYTGAIFT ALGYPRHIAP RTPTGAFSGM PVDYAGSYGD LANPVAILER MDNKTPTTNI
NINPYAEIYF TRDLVFRSNF AFTRSLTDQK SFSTRALEIG KINTSNGLSE SVNNGTNLLA
EQTLTYTKTF NGVHNVNAVA GYTYQHDDYT YLFVSASNFG DERDVYRYFD NAGTWAKPSS
GRSQTAVESF LGRVNYDYKS KYLFTILGRR DGSSLVAPQN RYQNYYSVSG GWVLTQEDFI
PNSSVLSFAK VRASYGVLGN LGSLPANAIN INLKSVNIYT GANGTQTTGL AEDALSNPNL
TWADSRQINF GTDLAFFKNS LSLTADYFIK TTENMILQVD PPSTAGVSTG MYKNMGKARD
NGIELGINYN GRAGKEFTYG IGATLTKVNN KLLELEDGRN EVVSSSNINV RSTLNPIVTR
VGNQIYAYNV IKTAGIFQTQ AEVDNYKNKD GQLIQPNAKP GDRKFVDKDG NGTINNNDRE
IVGSPFPSFS YGLSLNAAYK GFDLNVFAQG VQGNKLFNAL KYTNMNASIG TNYNMLTGIL
DAWTPTHTNT DVTRIISTDK NGNYGNTSDW YIENGSYLRI KNITLGYTLP ALLSNRAHVG
AVRLYLTATN LFTITKYKGY DPEVGMDELG IDKGRYPQAK NVLIGLNVNF
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