Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_9052 |
Symbol | |
ID | 8340447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10465237 |
End bp | 10465815 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644962144 |
Product | single-stranded nucleic acid binding R3H domain protein |
Protein accession | YP_003119706 |
Protein GI | 256398142 |
COG category | [R] General function prediction only |
COG ID | [COG1847] Predicted RNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0131851 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.817488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACA CCACCGCGGT GACCGAGGCC GAGGCCTCCG ACCTGGTCGA CGCCGAGCCG GGCACCGGAC AGGAGCGGGT CGACAAGTCC GCCGAGCGCG CCCCCGAATC GCCGGCCGAG CGCATCGCCC GCCTGGAGCG CGAGGGCGAC ATCGCCGCCG ACTACCTGGA GGGCCTGCTC GACATCGCCG ACCTGGACGG CGACATCGAC ATGGACGTCG AGGGCGACCG GGCCTCGGTC TCCATCGTCG GCGGCAAGCT CTCGCACCTG GTCGGCGGCG AGGGCGAGGT CCTGGACGCG CTGCAGGAGC TCACGCGGCT GGCGGTGCTC CGCGAGACCG GCGAGCGCTC CCGGCTGATG CTGGACATCG ACGGCCACCG CGCCACCCGC CGCTCCGAGC TCACCCGGAT CGGCACCGAG GCGGCGCGCA AGGTCGCCGA GACCGGCGAG CCGGTGAAGC TCTCCGCGAT GTCGCCCTTC GAGCGCAAGG TGGTGCACGA CGCGGTGGCG GCGGCCGGGC TGCGCAGCGA GTCCGAGGGC GAGGAACCCC ACCGCTGTGT GGTTGTGCTT CCCGTCTGA
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Protein sequence | MSDTTAVTEA EASDLVDAEP GTGQERVDKS AERAPESPAE RIARLEREGD IAADYLEGLL DIADLDGDID MDVEGDRASV SIVGGKLSHL VGGEGEVLDA LQELTRLAVL RETGERSRLM LDIDGHRATR RSELTRIGTE AARKVAETGE PVKLSAMSPF ERKVVHDAVA AAGLRSESEG EEPHRCVVVL PV
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