Gene Caci_9052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9052 
Symbol 
ID8340447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10465237 
End bp10465815 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content74% 
IMG OID644962144 
Productsingle-stranded nucleic acid binding R3H domain protein 
Protein accessionYP_003119706 
Protein GI256398142 
COG category[R] General function prediction only 
COG ID[COG1847] Predicted RNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0131851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.817488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA CCACCGCGGT GACCGAGGCC GAGGCCTCCG ACCTGGTCGA CGCCGAGCCG 
GGCACCGGAC AGGAGCGGGT CGACAAGTCC GCCGAGCGCG CCCCCGAATC GCCGGCCGAG
CGCATCGCCC GCCTGGAGCG CGAGGGCGAC ATCGCCGCCG ACTACCTGGA GGGCCTGCTC
GACATCGCCG ACCTGGACGG CGACATCGAC ATGGACGTCG AGGGCGACCG GGCCTCGGTC
TCCATCGTCG GCGGCAAGCT CTCGCACCTG GTCGGCGGCG AGGGCGAGGT CCTGGACGCG
CTGCAGGAGC TCACGCGGCT GGCGGTGCTC CGCGAGACCG GCGAGCGCTC CCGGCTGATG
CTGGACATCG ACGGCCACCG CGCCACCCGC CGCTCCGAGC TCACCCGGAT CGGCACCGAG
GCGGCGCGCA AGGTCGCCGA GACCGGCGAG CCGGTGAAGC TCTCCGCGAT GTCGCCCTTC
GAGCGCAAGG TGGTGCACGA CGCGGTGGCG GCGGCCGGGC TGCGCAGCGA GTCCGAGGGC
GAGGAACCCC ACCGCTGTGT GGTTGTGCTT CCCGTCTGA
 
Protein sequence
MSDTTAVTEA EASDLVDAEP GTGQERVDKS AERAPESPAE RIARLEREGD IAADYLEGLL 
DIADLDGDID MDVEGDRASV SIVGGKLSHL VGGEGEVLDA LQELTRLAVL RETGERSRLM
LDIDGHRATR RSELTRIGTE AARKVAETGE PVKLSAMSPF ERKVVHDAVA AAGLRSESEG
EEPHRCVVVL PV