| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_9049 |
|---|
| Symbol | |
|---|
| ID | 8340444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 10461834 |
|---|
| End bp | 10463030 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644962141 |
|---|
| Product | parB-like partition protein |
|---|
| Protein accession | YP_003119703 |
|---|
| Protein GI | 256398139 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.740864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.284166 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCAGCA GCCGACGCGG ACTGGGCAAG GGCCTGGGTG CTCTGATCCC CACCGGCGCC
CCGCCCGCGA TACTGTCCGA GAAGACCCGG GCGGAGTCGG CGAGTGCTCC GGCCGCCGGC
GATGTTTCCC GTGAAACAAG CATCGACGTT TCCCGTGAAA CATCGGTCGC GACCGCGCCG
CCGCGCACCG CGCTGGGGTC TCTGCCGATC GAGACCGACT ATCGGACCAC CGAGGACCGC
AGCGATCGGG CGTTCTCGGC GTCGATCCCG GCTCCCTCGG CGAGCCGCGA GTCCTTCGCC
GACGAGAGTC TTCCGGACGG GCTGATGCCG GTACCGGGCG CCTCGTTCGC CGAGATCCCG
CAGGGCCAGA TCCGCCCGAA CCCGGTGCAG CCCCGGACGG AGTTCGACGA AGTCGCTCTG
GCCGAGCTGG TCGCCTCCAT CAAGGAAGTC GGCCTGCTGC AACCGATCGT GGTGCGGCAG
CTTCCGGAGC CTGACGGCGA GCATCGCTAC GAACTCATCA TGGGTGAGCG TCGGTGGCGG
GCTTCCCAGG AAGCCGGGCT GTCGGCGATC CCCGCCATCA TCCGCGACAC CCGCGACGAC
CGGATGCTCC TGGACGCGCT TCTGGAGAAC CTCCAGCGTG CCCAGCTGAA CCCGCTCGAA
GAGGCGGCGG CGTACGACCA ACTCCTGAAG GACTTCGACT GCACGCACGA GGTCCTCGCC
GAGAAGATCG GCAAGTCCCG TCCGCACGTG ACCAACACGC TGCGGCTGCT CACTCTGACC
CCGGGCATCC AGCGCCGGGT CGCGGCCGGC GTCATCACCG CCGGGCACGC CCGGGCCCTG
CTGGGTCTGA AGTCGGTCGA GCAGCAGGAA GAGATCGCCA AGCGCATCGT CCGGGAGAAC
CTGTCGGTGC GGGCGGTCGA GGAGCTGGCC GGCATGGGCC GCTGGGACGC GGCGGCACTG
GACACCGCAC TGACCGAGAC GCCCGAGGAC TACCTCGACT TCACCGACAA GCCCAAGAAC
AAGCGGGTGC GCTCGGGGAG CCGGATGCCG ATCCTGGAGG ACTTCGGCCA GCGGCTGTCG
GATCGGCTGG AGACTCGGGT GAAGGTCGAC ATCATGCAGA AGCGTGGTCG GATCACCATC
GAGTACGCGG GGATAGAGGA TCTCAAGCGG ATCGCGAAGG CGATCCTCGG CGAGTAG
|
|---|
| Protein sequence | MSSSRRGLGK GLGALIPTGA PPAILSEKTR AESASAPAAG DVSRETSIDV SRETSVATAP
PRTALGSLPI ETDYRTTEDR SDRAFSASIP APSASRESFA DESLPDGLMP VPGASFAEIP
QGQIRPNPVQ PRTEFDEVAL AELVASIKEV GLLQPIVVRQ LPEPDGEHRY ELIMGERRWR
ASQEAGLSAI PAIIRDTRDD RMLLDALLEN LQRAQLNPLE EAAAYDQLLK DFDCTHEVLA
EKIGKSRPHV TNTLRLLTLT PGIQRRVAAG VITAGHARAL LGLKSVEQQE EIAKRIVREN
LSVRAVEELA GMGRWDAAAL DTALTETPED YLDFTDKPKN KRVRSGSRMP ILEDFGQRLS
DRLETRVKVD IMQKRGRITI EYAGIEDLKR IAKAILGE
|
|---|
| |