| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_9047 |
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| Symbol | |
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| ID | 8340442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10459101 |
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| End bp | 10460414 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644962139 |
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| Product | putative transcriptional regulator, GntR family |
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| Protein accession | YP_003119701 |
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| Protein GI | 256398137 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.779817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.283217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTCC CGCAGCGTCC GGGTTCCCGG CTCGACTCGT ATGTCGACCG TTACGCAGCC
AGGACCCGCG GGATGACCGC ATCCGAGATC CGAGCTCTGT TCGCCGTGGC CTCCCGGCCG
GAAGTGGTGT CGCTCGCCGG CGGCATGCCG AACCTCGCGG CGCTGCCGAT GGACTCCATC
GCCACGGTCG CCGAGGAGCT GGTCCGCGAG TCCGGCACCG TCGCGATGCA GTATGGCGGA
GCCCAAGGCG ATGAGACCCT GCGCGAGCAG ATCTGCGAGA TCATGCGCCT GGAGGGCATC
GAAGGCCACC CCGACGACGT CATCGCGACG GTCGGCTCGC AGCAGGCGCT GGACCTGGTC
ACCCGGATCT TCATCGACCC CGGCGACGTC ATCCTCGCCG AGGGTCCCTC CTATGTGGGC
GCACTCGGCG TCTTCGCCTC GTACCAAGCG CAGGTGGTCC ACGTCGCGAT GGACGACCAG
GGCCTGGTAC CGGACACCCT GCGCACGGCG ATCGCCTCGG TGAAGGCTTC CGGCCGCCGC
ATCAAGTTCC TCTACACGAT CCCGAACTTC CACAACCCCG CCGGCGTGAC GATGGCCGTC
GAACGGCGTC CGGAGATCGT TGAGATCTGC CGCGACGCGG GGATCCTGAT CCTCGAGGAC
AACCCCTACG GACTGCTCGG GTTCCAGGGC GAGATCTACC CGGCGCTGCG TTCGCTGGAC
ACCGAGAACG TCATCTATCT CGGATCGTTC TCCAAGACAT TCGCCCCCGG GTTCCGTGTC
GGCTGGGCTC TGGCGCCGCA CGCCGTGCGC GAGAAACTGA CGCTGGCGGC CGAGGCCGCG
GACCTGTGTC CGCCGGCCTT CTCGCAGATG ATGGTCTCCC GCTACTTGAG CACTCAGCCG
TGGCGCGAGC AGATCAAGGC CTTCCGGGCC ATGTATCTGG AGCGCCGCGA CGCGACGCTG
ACGGCGCTGT CCGAGCTGAT GCCCGCGGGT GTCACGTGGA CCAAGCCCGA CGGCGGCTTC
TACGTGTGGG TCACGCTTCC ACCGGGACTC GACTCCAAGG CGATGCTGCC CCGCGCCGTC
ACCGCGCGCG TGGCGTACGT CCCGGGCACG GGCTTCTACT CGGACGGATT CGGCGCGTCC
TCGCTGCGGC TGTCCTACTG CTACCCGACG CCGGAGCGCA TTCGCGAGGG CGTGCGGCGG
TTCGCCGACG TCCTGCGCGA GGAGATGGAA CTGCGCGCCG CCTTCGGACA CGAGGCGTCC
CGGGCGTTGG AGAGCCGCGA AGGCGTCGAC ACGCCCGGCC CGGATCTGGC CTAG
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| Protein sequence | MELPQRPGSR LDSYVDRYAA RTRGMTASEI RALFAVASRP EVVSLAGGMP NLAALPMDSI
ATVAEELVRE SGTVAMQYGG AQGDETLREQ ICEIMRLEGI EGHPDDVIAT VGSQQALDLV
TRIFIDPGDV ILAEGPSYVG ALGVFASYQA QVVHVAMDDQ GLVPDTLRTA IASVKASGRR
IKFLYTIPNF HNPAGVTMAV ERRPEIVEIC RDAGILILED NPYGLLGFQG EIYPALRSLD
TENVIYLGSF SKTFAPGFRV GWALAPHAVR EKLTLAAEAA DLCPPAFSQM MVSRYLSTQP
WREQIKAFRA MYLERRDATL TALSELMPAG VTWTKPDGGF YVWVTLPPGL DSKAMLPRAV
TARVAYVPGT GFYSDGFGAS SLRLSYCYPT PERIREGVRR FADVLREEME LRAAFGHEAS
RALESREGVD TPGPDLA
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