Gene Caci_9045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_9045 
Symbol 
ID8340440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10457048 
End bp10458097 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content71% 
IMG OID644962137 
Producthypothetical protein 
Protein accessionYP_003119699 
Protein GI256398135 
COG category[S] Function unknown 
COG ID[COG2090] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.638728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCACC GCAGGCAGCG CTCCCGGCCG CGCCCCTACC CTGGAGGCGT GCCCCATCCC 
CACCAAGCCG TCCTCGTCGG CCGCGGACAC CCGGCGATCC GGGCGACCCA CGCGAAGACC
TTCGAGCTGA CCGCGGAGCC GGCCATCAGC GCGCGGGCCA CCTGCGTGCT CGCTGTCGGC
ACCGTGCTGG ACCCGAATCT GGCTCCATTG CGCGGTCGTG TCCGGCTGAC CCTGGCGACT
CCGGGACTGC CCGCACTCAC CGGTGAGGCC ACGCTGAACC CGCGCCGCGC GCTCACCGAC
CGGGCCGTCA TCCGCCGCAG CCGCACCCTC GACGCGGACA CGCTGGCCGT CGACTCGACC
CTCACCGCCG ACGACCTTCC CGAGGCGTTC GCCGCGGCTC TCACCGATCC GGGGCGCGAG
GTCACTCTCA CCGTCGAGGA GATCGGGCCG GGTCGGCCGC TGCTCCAGGT CGGCTTCGGA
GAGCGGACGC ATCTCCCGTC GCTGAAGGAT GTCGGCGCCC AGGACACCCT GGTGCTGACC
ATCGCGCCCG ACGCACCGCC CAAGGAGGTC GTCGCGACCA ACGCAGTGCT CGAACGAGCC
GCCGCTGCCG GCGCCCGCGT CTCGGTGGCC AGCCCGCACA AGCCTCTGGA AGCCCTATTG
GCCGCGGGTC TACCTCCGTA CCCCTACGCA TACTGGGGAA GCCCACAGCG CCTCTCCACG
CTCCCTCTGA CGGCCACCGT GTTCCACATG CCACCGGCGA CGGATGCCTC CCTGCTCGCC
GGGCGTGACA TCTGGATCGA GGACACCTCA GAGCTCGATA TCGGCACCGC CATGACGCGC
ACAACGCCGT CCGCAGCCGT CGAAGCTTCC GGTGTCCTGA CCGTCGTCGG CCCGGCGTCA
TCAGAGGCCG AACTCGTCGA CCTCACCGCT GTCGCCCGCG CCCTCGTCGG AGCCGATATC
GCCCCGCGAA CCCTGACCGA GGCCCTGGCG CCCTTCGGAC TCACCCGCAA ACGGCTCTAC
GCGCTTCTCA CCGAGCAGGA CCAGACATGA
 
Protein sequence
MGHRRQRSRP RPYPGGVPHP HQAVLVGRGH PAIRATHAKT FELTAEPAIS ARATCVLAVG 
TVLDPNLAPL RGRVRLTLAT PGLPALTGEA TLNPRRALTD RAVIRRSRTL DADTLAVDST
LTADDLPEAF AAALTDPGRE VTLTVEEIGP GRPLLQVGFG ERTHLPSLKD VGAQDTLVLT
IAPDAPPKEV VATNAVLERA AAAGARVSVA SPHKPLEALL AAGLPPYPYA YWGSPQRLST
LPLTATVFHM PPATDASLLA GRDIWIEDTS ELDIGTAMTR TTPSAAVEAS GVLTVVGPAS
SEAELVDLTA VARALVGADI APRTLTEALA PFGLTRKRLY ALLTEQDQT