Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_9029 |
Symbol | |
ID | 8340423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10436361 |
End bp | 10438952 |
Gene Length | 2592 bp |
Protein Length | 863 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644962120 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_003119683 |
Protein GI | 256398119 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAGTTC TTTTTTGTCC GGTTGTCGGT GTCAGCCGCT ACCTTTGCTA CGTGTCCCTC GCGCTGTATC GCCGCTATCG GCCCGAGACC TTTGAGGAGG TCGTCGGCCA GGAGCACGTG ACGCTACCCC TGCAGCAGGC GCTCCGGAAC GGTCGGGTGA ACCACGCCTA CCTGTTCAGC GGGCCTCGGG GGTGCGGCAA GACCACCAGT GCGCGGATTC TGGCGCGCTG CCTGAACTGC GAGCAGGGAC CCACGCCGAC GCCGTGCGGG ACGTGCCGGT CGTGTGTGGA GCTGGCGAAC GGCGGGTCGG GGTCGATCGA CGTGATCGAG ATCGACGCGG CTTCGCACGG CGGGGTGGAC GACGCGCGCG ATCTGCGGGA GCGGGCCTTC TTCGCGCCGG CGGCGTCCCG GTTCAAGATC TACATCATCG ACGAGGCGCA CATGGTGACC TCGGCGGGGT TCAACGCCCT GCTGAAGGTC GTGGAAGAGC CGCCGCCGCA TCTGAAGTTC ATCTTCGCCA CCACCGAGCC GGAGAAGGTG ATCGGGACCA TCCGGTCCCG GACGCACCAC TATCCGTTCC GGCTGATCCC GCCCGGCGTG CTGCGCGAGC ACCTGAATGA CATCACCGCC CGCGAGGGCA TCAAGGTGGA GCCGGAGGTG CTGCCGCTGG TGGTGCGGGC CGGTGCCGGA TCGGCGCGGG ACGCGATGTC GGTGCTGGAC CAGCTGCTGG CCGGTGCCGA CGAGAACGGC GTCACCTACG CGATGGCCAC CGGGCTGCTC GGCTACACCG ACGCCGCGCT GTTGGACCGG CTGGTCGAGG CCTTCGCCGG GAACGACGGC GCCGCGGTGT TCGGCCTGGT GGACCAGGTC GTCGAGAGCG GGCACGATCC GCGGCGGTTC CTGACCGACC TGCTGGAGCG CTTCCGCGAC CTGGTGGTCC TGAACGCGGT CACCGACGCC GGAGCCGCCC GGGCCCTGAT CGACGTGCCC GACGACCAGT TCGAGCGGAT GGCCGGGCAG GCGCGGTCCT TCGGCGCCTC CGAGCTGTCC CGCGCGGCCG ACCTGGTGAA CACCGGGCTG ACCGAGATGC GCGGCGCCAC CGCGCCCCGC CTGCTGCTGG AGCTGGTGTG CGCCCGCGTG CTGCTGCCCG GCGCCGACGA CGCCGAGCGC GGCCTGGTCG CGCGGGTGGA CCGGCTGGAG CGGCGCGGCG TGGTGCTCGG CGCCGCCGCC CCCGCGCCGA TGGCGCCGAT GGGCAGCGGG CCGCGCGTGG TGGAGGACGA GTACGACGAG CCGCCGGTGC GCCGGCCGAG CGCTGCGGGT GCAGGCGCTG GCGCTTCGGT ACCGGCCGGT TCGGTGCCGA GCGGTGGGAA TCCGCAGAAT GCTCCGGACA ATCAGCAGGC AACTGGCGGG GGCAGTCTCG GAACGCCGCC TTGGGAGCAG GGCGGCGGCC CGTCTGCGGC GAACAGCGGC GGCGGGGCTG AGCAGTCCGC GGCGAACAGT GGAGGTGCGC CGAACCCGGC GGCCGGTCCG CTGGGGACAC CGCCGTGGGA GCAGGGCGCT GGCGCGCCGG CTGCCGCGAA CGCCAATGCC AACGCCAATA ACAACGCCAA CGCCAATGCC CCTGAGCCGA GCAGCACTGG CAGCGGACCT GCTGCCGCTA CCAGCCAGGG CGCCCTCGGC ACACCGCCGT GGGAATCAGG CGCGCCGAAC GCCGGTGCCA GCCAGCAGGC AAACGCCGGG CCCGGACCGT CTTCCGAAAG CGCACCCTCC TGGGCCGCCG ACGCCACCGC ACCCTCGAGC GCCAGCGTCC CCGAACCTCC GGCATGGGCA GCGGACGAAC CCAGCGCTCC CCAGCCGGCT CCGACTCCAG CCGCCGTCCC CCAACCGCAG CCCCAGCCCT CACCGCCTTC ACCAGGCGGC GCCGCACCCG CCGGCATCGA CATCCGCCGC ATGTGGCCGG ACCTGGTCGA GGAGGTCAAG CGCCGCGACG GCCGGGTGAG CTGGATGCTC CTGAGTCAGA ACTCGCAGGT GCTCGGCCTG GACGGCGACC GCCTGCAGGT GGCGTTCGTC AGCGCCGGCG CGCGGGACCG CTTCGTGAGC CGGGGGACCT CCGACACGCT GCGCCAGGCC GTGCGCGACA TGTTCGGCTT CCAGTGGCAG GTCGACGCGA TCGTCGATCC GTCGCAGACC CCTGGGACGC AGGTCGCGCC GGGCGTCTCC ATGACGCCGC CGCCCCCGGC GCAGATGCCT CCGCCGCCGA GCTCGTATCA GCCCTCGCAG GCTCAGCAGG CGGCGTCGCA GCCGTCCCAG CCCTCGCAGC CGTCACCGCC CCCGCAGCGT GAGCCCGAGC CGCCGCGTGC CGCCGCCCCG GCGTCGTCCG CGCACCAAGC TCAACAACCC TCACAGGCGC AGCAGAAGCC GGCTGCCGCC CCGGCGCCCC CGGCATCGCC GCCGCCACCC CCGACCCCTG TGGTCCGTCC CGAGGACGAT GTCGTCTCCG ACGACGACGA GGTCCTCGCC GAGGACAACG CCTCAGCCCA CGAACTCGTC GTCCGGGAAC TCGGCGCGCA GCGGTTGGAC GCCGAGGACT GA
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Protein sequence | MGVLFCPVVG VSRYLCYVSL ALYRRYRPET FEEVVGQEHV TLPLQQALRN GRVNHAYLFS GPRGCGKTTS ARILARCLNC EQGPTPTPCG TCRSCVELAN GGSGSIDVIE IDAASHGGVD DARDLRERAF FAPAASRFKI YIIDEAHMVT SAGFNALLKV VEEPPPHLKF IFATTEPEKV IGTIRSRTHH YPFRLIPPGV LREHLNDITA REGIKVEPEV LPLVVRAGAG SARDAMSVLD QLLAGADENG VTYAMATGLL GYTDAALLDR LVEAFAGNDG AAVFGLVDQV VESGHDPRRF LTDLLERFRD LVVLNAVTDA GAARALIDVP DDQFERMAGQ ARSFGASELS RAADLVNTGL TEMRGATAPR LLLELVCARV LLPGADDAER GLVARVDRLE RRGVVLGAAA PAPMAPMGSG PRVVEDEYDE PPVRRPSAAG AGAGASVPAG SVPSGGNPQN APDNQQATGG GSLGTPPWEQ GGGPSAANSG GGAEQSAANS GGAPNPAAGP LGTPPWEQGA GAPAAANANA NANNNANANA PEPSSTGSGP AAATSQGALG TPPWESGAPN AGASQQANAG PGPSSESAPS WAADATAPSS ASVPEPPAWA ADEPSAPQPA PTPAAVPQPQ PQPSPPSPGG AAPAGIDIRR MWPDLVEEVK RRDGRVSWML LSQNSQVLGL DGDRLQVAFV SAGARDRFVS RGTSDTLRQA VRDMFGFQWQ VDAIVDPSQT PGTQVAPGVS MTPPPPAQMP PPPSSYQPSQ AQQAASQPSQ PSQPSPPPQR EPEPPRAAAP ASSAHQAQQP SQAQQKPAAA PAPPASPPPP PTPVVRPEDD VVSDDDEVLA EDNASAHELV VRELGAQRLD AED
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