Gene Caci_8963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8963 
Symbol 
ID8340356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10373891 
End bp10374550 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID644962053 
Producthypothetical protein 
Protein accessionYP_003119617 
Protein GI256398053 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.24724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.866385 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCC GAACCGGGCT CCTGGCCGAC GACTTCTTCC TCATGGTCCA CGACGATCTG 
TCCGGACACC CGCGACTTCC GGACCGGATA CTTGGCCTCG GTCTGGCCAG CGCCCTGCTC
TGCGAACTGG CCGTCGTCGG CGCCATCGCC GTCGAGGGCG ACGAGGTGAC GGCCGTTACC
GGCTGGAAGC CGCCGACGTC CTCGCTCGCC GATGAGATCC ATCGCGAGAT AGCCGACGAA
CACCAACGTC TTCTGGTGAG GGACTGGCTC AACTACCTCG CAGCCAAGGC AATCGAACGT
GTCATCGCCA GGATGGCCGC CGAGCAGCTC CTCCACCGCA GACCCTCTCG CCTGAAGTTT
CTGGGCGTGG CGGACCGGTG GAGACCAGTG GACTCCACCA CTGCTGACTG GCCGGCGATC
GACGTGAAGA TCAAGGTCTA CAACGCCAAC GCCGACACTC ACCACCTCGT GTTGTTCGGA
CTGACTCGTG CCACCGGGCT CAGACACCCC TCCCTGTGGG AGGTACAGAA CCGACTGGAC
GACCCCGCGG CCCTGGAAGA AACGCTGGAG CCTCTGGACT ACAGCCCTCC TCTGCGGCAG
CTGCTGGCAC ACACCGAGGC CGCTGTCGGC AGTGCCGTCA CTAGCCAACG CATCGGCTGA
 
Protein sequence
MLTRTGLLAD DFFLMVHDDL SGHPRLPDRI LGLGLASALL CELAVVGAIA VEGDEVTAVT 
GWKPPTSSLA DEIHREIADE HQRLLVRDWL NYLAAKAIER VIARMAAEQL LHRRPSRLKF
LGVADRWRPV DSTTADWPAI DVKIKVYNAN ADTHHLVLFG LTRATGLRHP SLWEVQNRLD
DPAALEETLE PLDYSPPLRQ LLAHTEAAVG SAVTSQRIG