| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8962 |
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| Symbol | |
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| ID | 8340355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10372324 |
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| End bp | 10373838 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644962052 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003119616 |
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| Protein GI | 256398052 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.354248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAGAC GATCACCGGC TCCTAGCAAG GTCTCAGAAA CGCTGGCCCG CGACCGGCTC
GGCGTCACCG GCGTCATGTT CTTCATCCTG GCCGGGGTCG CGCCGCTGAC CGTGACCGCC
GGAGTCGTGC CCACCGCCTA CGCCGTCACC GGGCTGACCA GCGTCCCTGC CGCGTTTCTG
GTGGTCGCGG TGGTCCTGGC CGTCTTCGCC GTCGGGTATG TCGCGATGGC CCAGCGCATC
CCGAACGCCG GCGCGTTCTA CGCCTTCATC TCCCAGGGCC TGTCCAAACC GGCTGGCGTC
GGCGGCGCGC TGGTCGCTGT GGTGGCGTAC AACGTCCTAC AGGTCGGGCT CTACGGGATG
ATCGGGCCGT CGTTGCAGTC GTTTGCCGCC GACAACTTCG GCCTGAATGC GCCCTGGGGG
GTCTGGGCGT TCGGCGCCTG GGCGGTGGTG ACCGTGCTGG GCCTGATCCG CGTGGACCTG
TCCGGTCATC TGCTCGGCGT GCTGTCGACG ATCGAGCTGC TGGTCATCAT CGCGCTGACG
GTGCGGGGTC TGGCGCATCC GGCGGCCGGG GGAATCAGCG CGGCTGCGCT GTCTCCGACC
AGTCTGCATT TCGCCGGGCT CGGCGCGGTT CTGGCAGTCG CCGTGCTCGG GTTCACCGGT
TTCGAGCAGG CCCCAGTGTT CAGCGAGGAA GCCCGCGACG CCAAGCGCAC GATCCCGCTG
GCCACGTTCG TGTCCCTGGC GGTGATCGCG GTGGTCTACG CCGGTGCGTC CTGGGCGTTG
GACGTGCACT ACGGGAACCA GGTGGTAGCG ACCGCTCAAG GCCCCGCGAG TCCGACGATG
CTGTTCGCCA TGGCCCCGGG CCTGCTGGCA AGTACCGCCC GCACACTGTT CCTGACGAGC
CTGATCGCGG CGGCGTTGGC ATTCCACAAC GCGGTCGGCC GGTACATGTG GGCTCTGGGC
CGGGAGCGGG TGCTGCCGGC GATCATGGGA ACGACCGGGA GCAACGGCGT CCCGAAGGCA
GCCTCGGGAG TGCAGAGCCT GTTCGGTGCG GTGGCGATCG GGCTGACGCT GGGACTGCAC
TGGGATCCGG TCGCGAAGCT GTTCTTCTGG GGCGGCACCA CCGGCGGTTT CGGTATCCTG
CTCCTGTTGG CTGCCACCTC GGCCGCGGTC GTGAAGTACT TCGCCAGAAC ACCGGGCGAT
GAGACCGTGT GGCGACGCCT GATCGCCCCC GTCGCGTCGA CCGTGCTGCT GACGGTGATG
GCCTGGCTGT GCGTCGACCA CTACGACGTG CTGCTCAACG TGCCTCCCGG CTCGCTGGCC
ACCAGGGTCC TTCCCGGACT GTTCGCCGTT GCCGCCGTGA TCGGGATCGG CTGGGCGCTG
GTCCTCAGGC GTCGGCAGCC GGACGCCTAC GAGATGATCG GCCTGGGCGG AGCCGCCGCG
CTGGCCCGCA CCGCTGCCAG CTCCACCCCG TCCGCAGCCG CGAAGCCGGC TCGTGCCGGG
CGGGCCGCCC GGTGA
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| Protein sequence | MPRRSPAPSK VSETLARDRL GVTGVMFFIL AGVAPLTVTA GVVPTAYAVT GLTSVPAAFL
VVAVVLAVFA VGYVAMAQRI PNAGAFYAFI SQGLSKPAGV GGALVAVVAY NVLQVGLYGM
IGPSLQSFAA DNFGLNAPWG VWAFGAWAVV TVLGLIRVDL SGHLLGVLST IELLVIIALT
VRGLAHPAAG GISAAALSPT SLHFAGLGAV LAVAVLGFTG FEQAPVFSEE ARDAKRTIPL
ATFVSLAVIA VVYAGASWAL DVHYGNQVVA TAQGPASPTM LFAMAPGLLA STARTLFLTS
LIAAALAFHN AVGRYMWALG RERVLPAIMG TTGSNGVPKA ASGVQSLFGA VAIGLTLGLH
WDPVAKLFFW GGTTGGFGIL LLLAATSAAV VKYFARTPGD ETVWRRLIAP VASTVLLTVM
AWLCVDHYDV LLNVPPGSLA TRVLPGLFAV AAVIGIGWAL VLRRRQPDAY EMIGLGGAAA
LARTAASSTP SAAAKPARAG RAAR
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