Gene Caci_8943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8943 
Symbol 
ID8340336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10356451 
End bp10357359 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID644962033 
Producthypothetical protein 
Protein accessionYP_003119597 
Protein GI256398033 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0127518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.635311 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG ACGACGCCCC GCGGTGGAAG GCCGCAGTCT TCGGTAGCCG CGACGAGAAC 
CCGCGCTCGC TGCTGCCTAA GACCGATGAG GAGCCCGACC CGGACGAGCC TTCATCGGAG
GCCAAGCCGT TCGCCGCGCC CAGCGTGCCC CGGCAGGGAC GAGGCCGCTC GGGACTTCCT
TCGAGAGCGC TCAGGGACCG GCGCCGCGGC CAGCGACCCG CCGAACACGC CGGAATCCGC
GAGTGGCACG CGATGAACTC GGAGGAACGC CGGGCTGCCT GGCCACAGCT CGTCGCGTGG
GTCACATGGC TGCACGACCG CTATGAGTTG AGCGTCGAGA CACGCCTGCC CCGCTGCTGG
AGCCAGCACC CGGGCCTGAT CGAGGAGCTG TACGCGCTGA AGGTGTGGCG CGAGGAGATC
TACGGCGCCA AAGGCCCCAG CGGGCAGGCT GCCCGCTACT GGCATAACGA GTTGCGGCAA
CTGATCACAG GTGGCGTGAT GTTCTACGCC CGCAACTGTC GAAGCGGCCA CAAGAGCGAT
GGCGTCGTGC CCGCCGCGAT ATCACCGGAG ATCCAGTCCG CTTGGTCTGC CGGCGACCCA
CTCGCGGGCG TGCCCGCGGA CCTGCTAGCC GTAGCGAAGA AGGAGAGCAT GAGCGACCGC
GACTTGTTCC TGACCACAGC GACCATGGCG GCCCACCTCG CCAGCGGCAA CGCCACCCCG
ATGAGCCGGT CCGTCGACAC CTTCGTGTCC TACCAGCAGT TCTGGTGGAA GCGCACTGAC
GACGGCTGGG CCAAGGTCAC CGACGTCGTG ACCTCCCAGG GGCTCGACTT CCGGCAGTCC
CACCTGGCTG AAGCAGACGC CCGAGTGACT GCCTTCACCA CCCGCTCCAA CCGCCCTGCA
GAAAGCTAG
 
Protein sequence
MTNDDAPRWK AAVFGSRDEN PRSLLPKTDE EPDPDEPSSE AKPFAAPSVP RQGRGRSGLP 
SRALRDRRRG QRPAEHAGIR EWHAMNSEER RAAWPQLVAW VTWLHDRYEL SVETRLPRCW
SQHPGLIEEL YALKVWREEI YGAKGPSGQA ARYWHNELRQ LITGGVMFYA RNCRSGHKSD
GVVPAAISPE IQSAWSAGDP LAGVPADLLA VAKKESMSDR DLFLTTATMA AHLASGNATP
MSRSVDTFVS YQQFWWKRTD DGWAKVTDVV TSQGLDFRQS HLAEADARVT AFTTRSNRPA
ES