| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8941 |
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| Symbol | |
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| ID | 8340334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10353094 |
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| End bp | 10354611 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644962031 |
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| Product | hypothetical protein |
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| Protein accession | YP_003119595 |
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| Protein GI | 256398031 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.57395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.334134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTCA CGAACAAGTC CAAGAAGACG CGGCTGCCGG AAGTGGACTT CGCCAGCCTC
CTGGCCCCCG CGTCCGACAC CGCGCAGCAG TCCGCGGGCA CCGCGACGTC AACGACCGAC
AGCAAGAAAC GCAAGGTTCC GGCCGACCCG ACGCCACCGC GCCGCGGGTA CGCCCGGAAG
TTCGCCGGTC GCGCTCCCAA GACGCCCCCG ATCCCAGTCT TCCGCAGCTC TACCGGGCAG
TTCTCCGGGC TGTATCCGTG GCTGTACGGC CAGAGCATGC CGCCGGTCGG CGTCTACATC
GGTGTCGACT GCCTCACCGG CGGGGCTTTC TCCTGCCACC CGATCGAATG GCTCCACAGC
GGCCTGATCA CCAACCCGAA CATGCTGATC ACCGGCGTGC CCGGAGCGGG GAAGAGCGCC
GCCATCAAGT CCTTGGCCAT GAGGCTGATG GCGTACGGCG TCAAGACGTT CGTCCTGGGC
GACATCAAGA ACGAATACGC GGCCCTGTCG AGAGCGCTCG GTGTGGAACC GGTCGAACTC
GGACCGGGCC TCGGCGCCCG CCTCAACCCG CTGGACGCCG GACCGCTCGG CATGAACCTC
CCCGCCGACC CGGAACTCCT GCGCGAGCGC CTGGAGGAAA TCCACCGACG CCGCATCACC
CTGCTCGCTT CGCTGGTCGT CATGCGCCTT GGCCGCGCTC TGACCCCGAC CGAGGAAGCG
GCCTTCTCTC TGGCGATCAA GCAAGCTTCG GGGGAAGCCG CTGGGAACAG GCTCATCGAC
CCGACGATTC CCCAGGTGTG GGCGCTGCTG CGTGACCCGC TGCCGGAGAT GGCCGAGGAA
CTGCGCGTTC GTGACGGCGA TGTAGACGAA CTGCGGGAGA TGATTCGTCC GGCCGTCGAC
GCGCTGGGCA ACATGGTCCA GGGCTCCTTG AGCGGCTTGT TCGACGGACC GACCACGGTC
GGCGTCGACT TCTCCGCGCC TATTCAGACC GTTGACCTGT CCCGGATCGA CGGCCGCGGC
GACGAGACCG TGGCGATGAC GCTCGCCTGT GTGTCCAGCT GGGGCCAGGC CGCGATTGAC
GAGCCCGGCG GTCCGGTCCG CCTCGTCGTG CGCGACGAAC TGTGGCGGGC AATGCGCGTC
CCGGCGATGA TCCGCAAACT CGACTCGGAC CTGCGCCTGT CCCGAGCTCA GGGCACCATC
CAGGTTCTGA GTACGCACCG ACTGGCCGAC TTCGAGGCCG TAGGCGCGGC CGGCTCCGAG
GAAGTCACCA TCGCAAAGAA TTTGATCGCA AGCTGTGACG TGCGGATCTG CCTGCGGCAA
GACACCGCGC CGCTCGCGAT GACGCGTGAG GCCATCGGCC TTACCGACAC CGAGTGCGCG
CACATCGCGA GCTGGTCGGG CGAACACCGC GGACGTGCCG TCTGGAAGGT CGGCCGCAGC
GCCAGCCACG TCGTGCAGAC CGTGCTCACG CCGCTGGAGC GGCAGCTCTA CCACACCAAC
GAACGCATGG TCGTGTGA
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| Protein sequence | MALTNKSKKT RLPEVDFASL LAPASDTAQQ SAGTATSTTD SKKRKVPADP TPPRRGYARK
FAGRAPKTPP IPVFRSSTGQ FSGLYPWLYG QSMPPVGVYI GVDCLTGGAF SCHPIEWLHS
GLITNPNMLI TGVPGAGKSA AIKSLAMRLM AYGVKTFVLG DIKNEYAALS RALGVEPVEL
GPGLGARLNP LDAGPLGMNL PADPELLRER LEEIHRRRIT LLASLVVMRL GRALTPTEEA
AFSLAIKQAS GEAAGNRLID PTIPQVWALL RDPLPEMAEE LRVRDGDVDE LREMIRPAVD
ALGNMVQGSL SGLFDGPTTV GVDFSAPIQT VDLSRIDGRG DETVAMTLAC VSSWGQAAID
EPGGPVRLVV RDELWRAMRV PAMIRKLDSD LRLSRAQGTI QVLSTHRLAD FEAVGAAGSE
EVTIAKNLIA SCDVRICLRQ DTAPLAMTRE AIGLTDTECA HIASWSGEHR GRAVWKVGRS
ASHVVQTVLT PLERQLYHTN ERMVV
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