Gene Caci_8936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8936 
Symbol 
ID8340329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10348152 
End bp10348616 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content66% 
IMG OID644962026 
Producthypothetical protein 
Protein accessionYP_003119590 
Protein GI256398026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00203567 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.206926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAGA GGCCAGAGGA CGCCGATGAC ATCGGCGTGA TCGCCAAGCG CATCGAGCAC 
CTGTTCACGA CCGTCTACCC CGGGTCGCTG GGGCGGCCCT ACACGCTGCG CGAAGCCGTC
GAGAAGATCA ACGCTGACGC CGGCGAGAAC CTGATCTCGG TCGCCTACCT CAGCCAGCTG
CGCAACGGAG ACAAGCGCCA TCCGGCGTTC GACAAGCTCG CGGGGGTAGC CAAGCTCTTC
GGCGTGAGCA CCGACTACTT CCTGGACGAC GAGACGGCCG CCAGGACTGA CCAGCAGTTG
GCCTTGGTCG CCGCGATGCG CGAACAGGGC GTGGACCGCC TTGCGACGCG GTCCTTGGGA
CTGTCGGCGA ACAGCCTCGA AGCCATCCTC GGCATGATCG AGAACGCGCG CAAGATCGAG
GGTCTGCCCG ATGACGAGGG CGACGTCCCG GCTCAAGGGC AGTGA
 
Protein sequence
MGERPEDADD IGVIAKRIEH LFTTVYPGSL GRPYTLREAV EKINADAGEN LISVAYLSQL 
RNGDKRHPAF DKLAGVAKLF GVSTDYFLDD ETAARTDQQL ALVAAMREQG VDRLATRSLG
LSANSLEAIL GMIENARKIE GLPDDEGDVP AQGQ