Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8899 |
Symbol | |
ID | 8340292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10309916 |
End bp | 10311283 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644961989 |
Product | histidine kinase |
Protein accession | YP_003119553 |
Protein GI | 256397989 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCTG TGCCGGGGGC ACCACAGAGA CAGAGACAGA CACCGCGCGG GGGCGTGGAC GGACTCGGCT TCAGCCGGAC CGAGCTGCTG ACAGTGGTGG CAACGGTGTG CGGGCTGATC CTGTTCGGAT ACGCCGACCT GCACGTACGC TTCGACGAGG CGCACGGCGT CTGGCGCCGC GGCGCCGAGG ACTCGTATGT GTGGCTCTTC GCCATCCTGC GCGCGCTGCC GATCCTGTGG TGCCGCCGGC ATCCGCTCAT CGCCTTCACC GCGACGCTCG CCGGGTCCGC CCTCGCCGGC GCTGCCCTGG CCTCGGTGGT CGGGGCGCCG CTGCCCTGGT CGGTCTGGCC GTGGTCGCCG TCGAGCCAGC TGTGTGTGCT GACGGCGCTG GTGGTCGCGG GCTGGGAGGT CGGGCGGCGG CGGAGCATGG AGATGGCCAC GGCGTACTTC CTGCTCACGC TGTTCCTGCA AACCCTCCGC CCCGGGTACG GCTTCGTCCT GAGCATCGGG TCGGTCATCG GCGGATCGGC GCTCGCGGTC GGCTGCCTGG AGCTGCTGCA CGACCGGCGC GACGCGCGGC AGGCGCTGGC GGTCCAGGAG GAGCTCACCG AGGCCGAGCG CGAGCGGCGC GCGCTGCTGG AGGAACGCGC TCGCATAGGC CGGGAGCTCC ACGATGTGGT GGCGCACCAC ATGTCGCTGC TCGCCGTCCA GGCCGAGACC GCGCCGTTCC GGATCACCGG TCAGAGCCCT GAGGCCGAGG CGGAGTTCCT CTCGATCGCC TCGGTGTCCC GCGAGGCGCT GAACGACATG CGCAAGCTGC TCGGTCTGCT GCGCGCGGAC TCGGCGGAGG CCGAGACCGC GCCGCAGCCG CGGCTGGCCG ACGTGCCGGC GCTGGTCCGG GAGGCCGGGG CGGAACTGGA GACGGTCGGC GACCTGGCGG AGGTACCGCC GCTGATCGGG GTGACGGCGT ACCGGGTGGT CCAGGAGTCG TTGTCGAACG CGCGGCGGCA CGCGCGGGGC GCCGAGGTCT CGGTGCGGAT CGCGCGGACC GGCGAGGAGG TGCGGATCGA GGTGCGGAAC GGGCCTTCGG CGGGGGACGC GCAGCAGGTC GCTGATAATG CGCTCGAGGA TGAGCGTAAG GACGAGCCCG GCGACGAGTC TGATTCCGGG AGCGATTCCG AAACCACTAC CGAGGCAGCG CCCGAATCCG CCGCCGCATC CGACCAGGAC CCCGAACCGG CCGCGGGCCA GGGCATCATC GGGATGCGCG AACGCGTCCT GCTGGTCCAC GGCGACCTCG AGACCGGCCC GACCGCGAAC GGCGGCTTCG CCGTCACCGC GGTCCTCCCG CTGGAGAGCG ACGCGTGA
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Protein sequence | MTSVPGAPQR QRQTPRGGVD GLGFSRTELL TVVATVCGLI LFGYADLHVR FDEAHGVWRR GAEDSYVWLF AILRALPILW CRRHPLIAFT ATLAGSALAG AALASVVGAP LPWSVWPWSP SSQLCVLTAL VVAGWEVGRR RSMEMATAYF LLTLFLQTLR PGYGFVLSIG SVIGGSALAV GCLELLHDRR DARQALAVQE ELTEAERERR ALLEERARIG RELHDVVAHH MSLLAVQAET APFRITGQSP EAEAEFLSIA SVSREALNDM RKLLGLLRAD SAEAETAPQP RLADVPALVR EAGAELETVG DLAEVPPLIG VTAYRVVQES LSNARRHARG AEVSVRIART GEEVRIEVRN GPSAGDAQQV ADNALEDERK DEPGDESDSG SDSETTTEAA PESAAASDQD PEPAAGQGII GMRERVLLVH GDLETGPTAN GGFAVTAVLP LESDA
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