Gene Caci_8899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8899 
Symbol 
ID8340292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10309916 
End bp10311283 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content72% 
IMG OID644961989 
Producthistidine kinase 
Protein accessionYP_003119553 
Protein GI256397989 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCTG TGCCGGGGGC ACCACAGAGA CAGAGACAGA CACCGCGCGG GGGCGTGGAC 
GGACTCGGCT TCAGCCGGAC CGAGCTGCTG ACAGTGGTGG CAACGGTGTG CGGGCTGATC
CTGTTCGGAT ACGCCGACCT GCACGTACGC TTCGACGAGG CGCACGGCGT CTGGCGCCGC
GGCGCCGAGG ACTCGTATGT GTGGCTCTTC GCCATCCTGC GCGCGCTGCC GATCCTGTGG
TGCCGCCGGC ATCCGCTCAT CGCCTTCACC GCGACGCTCG CCGGGTCCGC CCTCGCCGGC
GCTGCCCTGG CCTCGGTGGT CGGGGCGCCG CTGCCCTGGT CGGTCTGGCC GTGGTCGCCG
TCGAGCCAGC TGTGTGTGCT GACGGCGCTG GTGGTCGCGG GCTGGGAGGT CGGGCGGCGG
CGGAGCATGG AGATGGCCAC GGCGTACTTC CTGCTCACGC TGTTCCTGCA AACCCTCCGC
CCCGGGTACG GCTTCGTCCT GAGCATCGGG TCGGTCATCG GCGGATCGGC GCTCGCGGTC
GGCTGCCTGG AGCTGCTGCA CGACCGGCGC GACGCGCGGC AGGCGCTGGC GGTCCAGGAG
GAGCTCACCG AGGCCGAGCG CGAGCGGCGC GCGCTGCTGG AGGAACGCGC TCGCATAGGC
CGGGAGCTCC ACGATGTGGT GGCGCACCAC ATGTCGCTGC TCGCCGTCCA GGCCGAGACC
GCGCCGTTCC GGATCACCGG TCAGAGCCCT GAGGCCGAGG CGGAGTTCCT CTCGATCGCC
TCGGTGTCCC GCGAGGCGCT GAACGACATG CGCAAGCTGC TCGGTCTGCT GCGCGCGGAC
TCGGCGGAGG CCGAGACCGC GCCGCAGCCG CGGCTGGCCG ACGTGCCGGC GCTGGTCCGG
GAGGCCGGGG CGGAACTGGA GACGGTCGGC GACCTGGCGG AGGTACCGCC GCTGATCGGG
GTGACGGCGT ACCGGGTGGT CCAGGAGTCG TTGTCGAACG CGCGGCGGCA CGCGCGGGGC
GCCGAGGTCT CGGTGCGGAT CGCGCGGACC GGCGAGGAGG TGCGGATCGA GGTGCGGAAC
GGGCCTTCGG CGGGGGACGC GCAGCAGGTC GCTGATAATG CGCTCGAGGA TGAGCGTAAG
GACGAGCCCG GCGACGAGTC TGATTCCGGG AGCGATTCCG AAACCACTAC CGAGGCAGCG
CCCGAATCCG CCGCCGCATC CGACCAGGAC CCCGAACCGG CCGCGGGCCA GGGCATCATC
GGGATGCGCG AACGCGTCCT GCTGGTCCAC GGCGACCTCG AGACCGGCCC GACCGCGAAC
GGCGGCTTCG CCGTCACCGC GGTCCTCCCG CTGGAGAGCG ACGCGTGA
 
Protein sequence
MTSVPGAPQR QRQTPRGGVD GLGFSRTELL TVVATVCGLI LFGYADLHVR FDEAHGVWRR 
GAEDSYVWLF AILRALPILW CRRHPLIAFT ATLAGSALAG AALASVVGAP LPWSVWPWSP
SSQLCVLTAL VVAGWEVGRR RSMEMATAYF LLTLFLQTLR PGYGFVLSIG SVIGGSALAV
GCLELLHDRR DARQALAVQE ELTEAERERR ALLEERARIG RELHDVVAHH MSLLAVQAET
APFRITGQSP EAEAEFLSIA SVSREALNDM RKLLGLLRAD SAEAETAPQP RLADVPALVR
EAGAELETVG DLAEVPPLIG VTAYRVVQES LSNARRHARG AEVSVRIART GEEVRIEVRN
GPSAGDAQQV ADNALEDERK DEPGDESDSG SDSETTTEAA PESAAASDQD PEPAAGQGII
GMRERVLLVH GDLETGPTAN GGFAVTAVLP LESDA