Gene Caci_8898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8898 
Symbol 
ID8340291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10309036 
End bp10309836 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content69% 
IMG OID644961988 
Productprotein of unknown function DUF347 
Protein accessionYP_003119552 
Protein GI256397988 
COG category[S] Function unknown 
COG ID[COG4705] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCG AACTGACCGG GCGGAGCTCG ACCGGCTCGG CCCGCCGCGG CCTGGCGTCG 
GCCACCGCCG CGAGCAAGGT CCCCGAGGTC ACGCTGATCT TCTGGATCAC GAAAATCCTC
ACCACCGGGA TGGGCGAGAC GACCTCGGAC TTCCTGAACC AGAAGTGGGA CCCGAAGATC
ATGGTCTCGC TGTCCGGGCT GGTGCTGGCC GGGGTGATCT GGGCGCAGTT CCGGGCGCCG
CGGTACTCGG CGTGGATGTA CTGGTCGGCG GTCGTCATGG TGAGCGTGTT CGGCACCATG
TGCGCCGACG TGCTCCACGT CGCCTTCGGC GTCCCCTACG CGGTGTCGAC CGCCTTCTTC
GCGGTCGCGC TCGCCGCGAT CTTCGTCCTC TGGTACCGGA TCGAGGGCAC GCTGTCGATC
CACAGCATCA CCACGCCGCG CCGCGAGCTG TTCTACTGGC TCACCGTCGT GACCACCTTC
GCGCTGGGCA CCGCCGTCGG CGACCTGACC GCCACGACGC TGAAGCTGGG GTACTTCTCC
TCCGGCGTGA TGTTCGCGGT GTTGTTCGCG GTGCCCGCGG TGGCGTACAA GTTCGGGCTG
AACGGGATCG TCGCGTTCTG GTTCGCCTAC GTCGTGACCC GGCCGTTCGG CGCGTCCTTC
GCCGACTGGA TGGGCGTCTC GGCCAAGCGC GGCGGCCTGG CGTGGGGGAC CGGGCCGGTC
AGCCTGGTGC TGCTCGCGAT CATCGTGGCG CTGGTCGCGG TGCTCGCGGT GACGAAGATG
GACGTCGCCC GGCAGGACTG A
 
Protein sequence
MTTELTGRSS TGSARRGLAS ATAASKVPEV TLIFWITKIL TTGMGETTSD FLNQKWDPKI 
MVSLSGLVLA GVIWAQFRAP RYSAWMYWSA VVMVSVFGTM CADVLHVAFG VPYAVSTAFF
AVALAAIFVL WYRIEGTLSI HSITTPRREL FYWLTVVTTF ALGTAVGDLT ATTLKLGYFS
SGVMFAVLFA VPAVAYKFGL NGIVAFWFAY VVTRPFGASF ADWMGVSAKR GGLAWGTGPV
SLVLLAIIVA LVAVLAVTKM DVARQD