Gene Caci_8897 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8897 
Symbol 
ID8340290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10308275 
End bp10308943 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content73% 
IMG OID644961987 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003119551 
Protein GI256397987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC CCACCCCGCC GCGCACCGCG CCCCGCACCG GACCGCTGTC CGGCCGCAAG 
GCCCAGGCCA ACCGCAACGA CGAGGCGATC CTGCGCGCCG CGCGCGAGGT CTTCGTCGCC
GATCCGTCCG CGCCGATCTC CGCCGTCGCC AAGGCGGCCG GTGTCGGGAT CAGCGCTCTG
TATCGAAGGT ACGAGAGCAA GGAGGTGCTG CTGCAGACGC TCTGCGCGGA CGGCCTGGCG
ACGTACATCG AGTGTGCCGA GGCGGCGCTG GCCTCCGACG CACCGCCGTG GGAGACGTTC
ACGGACTTCG TGCGCGCCGT GATCGACGCC GACGTGCACG CGCTGACCGT GAACCTCGCC
GGGACCTTCA CGCCGACCGA GGAGATGTTC GGCCAGTCCG TGCGCGCCGT GGAACTGGCC
GACGCGATCC TGAAGCAGGC GCACGAGGCC GGCGCGGTCC GTCCCGACTT CGCCCTCACC
GACATCGCCA TGCTGCTGGA GCAGCTGACG GCGGTCACCG GCCCGGGTCC GGAGCGGACC
AGGGAGCTGC GACACCGCTA CCTGGCGCTG CACTTCGACG CGCTGCGGGC GCACACGGCG
CACTCAGGGC TGCCGGGCCC GCCGCCGAGC GAGGAGGAAC TCGGCGCCCG CTGGATCCCG
AAGGGGTGA
 
Protein sequence
MTTPTPPRTA PRTGPLSGRK AQANRNDEAI LRAAREVFVA DPSAPISAVA KAAGVGISAL 
YRRYESKEVL LQTLCADGLA TYIECAEAAL ASDAPPWETF TDFVRAVIDA DVHALTVNLA
GTFTPTEEMF GQSVRAVELA DAILKQAHEA GAVRPDFALT DIAMLLEQLT AVTGPGPERT
RELRHRYLAL HFDALRAHTA HSGLPGPPPS EEELGARWIP KG