Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8897 |
Symbol | |
ID | 8340290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10308275 |
End bp | 10308943 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961987 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003119551 |
Protein GI | 256397987 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCC CCACCCCGCC GCGCACCGCG CCCCGCACCG GACCGCTGTC CGGCCGCAAG GCCCAGGCCA ACCGCAACGA CGAGGCGATC CTGCGCGCCG CGCGCGAGGT CTTCGTCGCC GATCCGTCCG CGCCGATCTC CGCCGTCGCC AAGGCGGCCG GTGTCGGGAT CAGCGCTCTG TATCGAAGGT ACGAGAGCAA GGAGGTGCTG CTGCAGACGC TCTGCGCGGA CGGCCTGGCG ACGTACATCG AGTGTGCCGA GGCGGCGCTG GCCTCCGACG CACCGCCGTG GGAGACGTTC ACGGACTTCG TGCGCGCCGT GATCGACGCC GACGTGCACG CGCTGACCGT GAACCTCGCC GGGACCTTCA CGCCGACCGA GGAGATGTTC GGCCAGTCCG TGCGCGCCGT GGAACTGGCC GACGCGATCC TGAAGCAGGC GCACGAGGCC GGCGCGGTCC GTCCCGACTT CGCCCTCACC GACATCGCCA TGCTGCTGGA GCAGCTGACG GCGGTCACCG GCCCGGGTCC GGAGCGGACC AGGGAGCTGC GACACCGCTA CCTGGCGCTG CACTTCGACG CGCTGCGGGC GCACACGGCG CACTCAGGGC TGCCGGGCCC GCCGCCGAGC GAGGAGGAAC TCGGCGCCCG CTGGATCCCG AAGGGGTGA
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Protein sequence | MTTPTPPRTA PRTGPLSGRK AQANRNDEAI LRAAREVFVA DPSAPISAVA KAAGVGISAL YRRYESKEVL LQTLCADGLA TYIECAEAAL ASDAPPWETF TDFVRAVIDA DVHALTVNLA GTFTPTEEMF GQSVRAVELA DAILKQAHEA GAVRPDFALT DIAMLLEQLT AVTGPGPERT RELRHRYLAL HFDALRAHTA HSGLPGPPPS EEELGARWIP KG
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