Gene Caci_8896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8896 
Symbol 
ID8340289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10307078 
End bp10308181 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content70% 
IMG OID644961986 
ProductEpoxide hydrolase domain protein 
Protein accessionYP_003119550 
Protein GI256397986 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC AGCAGAGCAC CGCGATCCGT CCGTACCGCG TCGAGATCCC CCAGGCCGAC 
CTCGACGACC TGCGTCGGCG GCTGGAGCAG ACCCGCTGGA CCTCGGTCCT CGACGGCGCC
GACGGCGAGT ACGGCACCGC GCTCTCCCGG GTCCGGCGGC TGGCCGAGTA CTGGCGCGAC
GGCTTCGACT GGCGCGCCTT CGAGGCGCGG CTGAACGCCC ACCCGCAGTT CCTGACCGAG
ATCGACGGCC AGGACATCCA CTTCCTGCAC GTGAAGGCGG ACGCCCCGAA CGGCACGGCG
CTGCTGCTCA CCCACGGCTG GCCGGGCTCC CAGGCCGAGT ACCTGGACGT GATCGAGCCG
CTGACCGCCG CCGGCTACGA CCTGGTGATC CCCTCGATCC CGGGATACGG CTTCGCCGGC
CCGACGACCG CGCAGGGCTG GAACCTGCAC CACACGGCCC GCGCCTGGGT CGAGCTGATG
GCGCGCCTGG GCTACCGGCG CTACGGCGCG GTCGGCAACG ACGGCGGTTC GATGATCTCC
CCCGAGGTCG GCCGCCTCGA CCCGGAGCAC TGCGTCGGCG TCCACGTCAC GCAGCTGTTC
TCGTTCCCCT CCGGCGACCC GGCCGAGCTG ACCGACATGA CCCCCGAGGA GAAGCAGGCC
ATCGAGACCC TGCAATGGTT CTGGGAGAAC ATGGGCTCCT TCAACCAGGT GCAGACCCAG
CAGCCGCAGA CCCTGGCGCA CGCGCTGTCT GACTCGCCGG TCGGCTTGCT CGGCTGGAAC
ATCCAGCTGC TGCCGGAGAA CCTCGACGAC GACTTCATCC TGGCCAACGT CGCCACCTAC
TGGTTCACCG GCACCGCCGG CTCAGCCCTG CGCTTCTATC GCGAGATGGC TCTGGACACC
GAGCGCCCCG AGGGCCCGAC CACGGTGCCC ACCGCGCTGG CCGGCTCGGC GAACGACTTC
TTCGGCATCC GCCGCTTCGC CGAGCGCGAC CACGCGAACA TCGTGCGGTG GAACGTGTAC
GAGACGCCCG GCCACTACGC CGCGCACCAG GCTCCCGAGG TGCTAGTGCG CGACGTCGTG
GAGTTCTTCG GCGGGCTCGG CTGA
 
Protein sequence
MTQQQSTAIR PYRVEIPQAD LDDLRRRLEQ TRWTSVLDGA DGEYGTALSR VRRLAEYWRD 
GFDWRAFEAR LNAHPQFLTE IDGQDIHFLH VKADAPNGTA LLLTHGWPGS QAEYLDVIEP
LTAAGYDLVI PSIPGYGFAG PTTAQGWNLH HTARAWVELM ARLGYRRYGA VGNDGGSMIS
PEVGRLDPEH CVGVHVTQLF SFPSGDPAEL TDMTPEEKQA IETLQWFWEN MGSFNQVQTQ
QPQTLAHALS DSPVGLLGWN IQLLPENLDD DFILANVATY WFTGTAGSAL RFYREMALDT
ERPEGPTTVP TALAGSANDF FGIRRFAERD HANIVRWNVY ETPGHYAAHQ APEVLVRDVV
EFFGGLG