| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8894 |
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| Symbol | |
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| ID | 8340287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 10304011 |
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| End bp | 10305570 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961984 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003119548 |
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| Protein GI | 256397984 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA CGACTATGGG CGGCCGGCGG CGCTGGCTCA TCCTGATCGT GCTGTGCCTG
GCCACGCTGG TGCTCGTCGT GGACAACATG GTCCTGACGG TCGCGGTGCC GGCGCTGACC
GAATCGCTGC ACGCCAGCGC GCAGAACATC CAGTGGGTCC TGGACTCCTA CATCCTGGTG
TTCGCCGGCC TGCTGCTGAC CACCGGAAGC CTGTCCGACC GGTTCGGGCG CAGAAGAGTC
CTGATCATCG GTCTAGCGGT GTTCGGCGTC GCCTCGGCGG TGGCCACCAT GGCGCACAAC
CCCGGCGAGC TGATCGCCGC CCGCGTCGCG ATGGGTATCG GCGGCGCGCT GCTGATGCCG
AGCACGCTGT CGATCCTGAT CACCGTGTTC ACCGACGAGG CCGAGCGGCG CAAGGCGATG
GCCGCCTGGA CCGTGGTGGC GATGGTCGGC CTGGTCGGCG GGCCGGTGCT GGGCGGCGTG
ATGATCAGCC ACTTCTGGTG GGGCTCGGTC TTCCTGCTGA ACATCCCGAT CGCGGTGCTG
GCCATCATCT CCGCGGTGGT CCTGATGCCG GAGAGCAAGG GCCCGTGGCG CAAGCCCGAC
CCGCTGGGCA CGGTCCTGTC GATCGTCGGC CTGACCTCGG CGGTGTGGGT CATCATCGAG
CTGCCGAAGG GCCTGACCCG GCCCAGCACC CTGACCGCCC TGGCCGTCGC GGTGGTCGCG
CTGATCTCCT TCGGGGTCTG GGAGACCCGG ATCGCCGAGC CGATGGTGCC GCTGCAGCTG
TTCAAGCAGC GCAACTTCTC CGGCGGCTCC TTCTCGCTGA CCCTGGTGCA GATCGGCAAC
GGCGGTCTGC TGCTGGTGAT GACGCAGTAC CTGCAGTTCG TGCTCGGCTT CTCGGCGCTG
AAGGCCTCGC TGTGCTTCAT CCCGCTGGCC ATCGCGGCTC TGATCTTCAA CACCCTGGGC
GCCGGGCTCG GGATGAAGTT CGGCAACCGG CCGCTGATGG TCGTCGGCCT GCTGATCTGC
GCGGTCGCCT TCGGCATCCT GGCCGATCTG GGGGTGAACG ACGGTCTGAC CAAGCTGTTC
GTCGGTCTGT TCCTGCTCGG CGCCGGCTCC GGCCTGGCGA TGCCGGCGGC GATCACCGCG
ATCATGGGCG CGGTCCCGCC GGAGCACGCC GGGGTCAGCT CCGCCCTGAA CGACACGGTC
CAGCAGACCG GTGCCGCGCT GGGTGTGGCG ATCATGGGCA CCGTGGTGGC CAGCCGGTTC
ACCGCGGCGA TGCCGGCGAA GGTCACCGGC GCCGCACGGC ACTCGCTCGG CGACGCCTAC
GGCATCGCGG CGAAGACCGG CGACAGCGCG CTGCTGGAAT CGGCCCGCAC CGCCTTCACC
TACGCGGCGT CCGTCGCCTA CATCGCCGGC GCGGTCGGCG TGATCGCCGC GGCCCTGGTG
TCCTTCGTGG TGCTGCGGGA CGACAAGCCG GCGGCGCCGG CCGACGGCGC GGGTGCTGCG
GGTGCTGCGG GTGCTGAGCA GGGCCACACC GACGGCACGC TGATCGGCGC CGAGGCCTGA
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| Protein sequence | MSETTMGGRR RWLILIVLCL ATLVLVVDNM VLTVAVPALT ESLHASAQNI QWVLDSYILV
FAGLLLTTGS LSDRFGRRRV LIIGLAVFGV ASAVATMAHN PGELIAARVA MGIGGALLMP
STLSILITVF TDEAERRKAM AAWTVVAMVG LVGGPVLGGV MISHFWWGSV FLLNIPIAVL
AIISAVVLMP ESKGPWRKPD PLGTVLSIVG LTSAVWVIIE LPKGLTRPST LTALAVAVVA
LISFGVWETR IAEPMVPLQL FKQRNFSGGS FSLTLVQIGN GGLLLVMTQY LQFVLGFSAL
KASLCFIPLA IAALIFNTLG AGLGMKFGNR PLMVVGLLIC AVAFGILADL GVNDGLTKLF
VGLFLLGAGS GLAMPAAITA IMGAVPPEHA GVSSALNDTV QQTGAALGVA IMGTVVASRF
TAAMPAKVTG AARHSLGDAY GIAAKTGDSA LLESARTAFT YAASVAYIAG AVGVIAAALV
SFVVLRDDKP AAPADGAGAA GAAGAEQGHT DGTLIGAEA
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