| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8893 |
|---|
| Symbol | |
|---|
| ID | 8340286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 10303049 |
|---|
| End bp | 10303867 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644961983 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003119547 |
|---|
| Protein GI | 256397983 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGAGCG TGGACAACGA CACCGACGAC TCCGACCCAG GCTTCGGCTC CGACTCCCCC
GCTCCGCCTC TGGCCTCGGT CTGGACCCGG CCGCAGCGCC GCCAGAAGGA GCAGCTCAGC
AGGGAGCGCA TCGTCGCCGA GGCGATCGCG CTGCTCGACG CGGACGGTAT CGAGGCGCTG
AGCATGCGCT CGCTGGGCCA GCGGCTGGGA GCCGGCGCGA CCTCGCTGTA CCGGCACGTC
GCGAACAAGG ACGAGCTCAT CGAGCTGGTG GTCGACGAGG TCTACGGCGA AATGGACGTC
CCGGAGGTCA CCGACCCCGC GAGCTGGCGG CTCGCCCTGC ACATCACCGC GCACAGCCTG
CGGCGGACCG GACTGCGGCA CATGTGGCTG ATGAGCGTGC TCGGGCAGGT CGGGCTGAAC
TACCTCGGCC CGAACGTCGT CGACGTGACC AGGCGGGGTC TGGCCATCAT GACCACAGCC
GGCTTCGACA TGCAGGAGGC GACCAAGGCG ATGAGCTCGG TGTCCTCCTA TGTCATCGGC
ATCACCTCCG CCGAGGCCGG GTGGCTGATG GCGTTGCGCC GCCAGGGTTA CTCCGAGCGC
GAGTGGTACG AGAAGGTGGG CCCGCAGATG GCGGACTCGG CCATCGACCC GGCGTTGGCG
GAGGTCTACC TGGAGCAGCT GGCCAAGGAC CCCCGCGAGG CCCGCGCGGA GAACTTCGCT
TACGGACTCG ACCTCATGCT GGACAGCCTG CAGGCGCGGC TGACCGCGAA GCTCGCCGCC
GGCGTCACCG GCCCGGTGGA GACCGCCGCC AGTCAGTAG
|
|---|
| Protein sequence | MESVDNDTDD SDPGFGSDSP APPLASVWTR PQRRQKEQLS RERIVAEAIA LLDADGIEAL
SMRSLGQRLG AGATSLYRHV ANKDELIELV VDEVYGEMDV PEVTDPASWR LALHITAHSL
RRTGLRHMWL MSVLGQVGLN YLGPNVVDVT RRGLAIMTTA GFDMQEATKA MSSVSSYVIG
ITSAEAGWLM ALRRQGYSER EWYEKVGPQM ADSAIDPALA EVYLEQLAKD PREARAENFA
YGLDLMLDSL QARLTAKLAA GVTGPVETAA SQ
|
|---|
| |