Gene Caci_8893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8893 
Symbol 
ID8340286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10303049 
End bp10303867 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content70% 
IMG OID644961983 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003119547 
Protein GI256397983 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAGCG TGGACAACGA CACCGACGAC TCCGACCCAG GCTTCGGCTC CGACTCCCCC 
GCTCCGCCTC TGGCCTCGGT CTGGACCCGG CCGCAGCGCC GCCAGAAGGA GCAGCTCAGC
AGGGAGCGCA TCGTCGCCGA GGCGATCGCG CTGCTCGACG CGGACGGTAT CGAGGCGCTG
AGCATGCGCT CGCTGGGCCA GCGGCTGGGA GCCGGCGCGA CCTCGCTGTA CCGGCACGTC
GCGAACAAGG ACGAGCTCAT CGAGCTGGTG GTCGACGAGG TCTACGGCGA AATGGACGTC
CCGGAGGTCA CCGACCCCGC GAGCTGGCGG CTCGCCCTGC ACATCACCGC GCACAGCCTG
CGGCGGACCG GACTGCGGCA CATGTGGCTG ATGAGCGTGC TCGGGCAGGT CGGGCTGAAC
TACCTCGGCC CGAACGTCGT CGACGTGACC AGGCGGGGTC TGGCCATCAT GACCACAGCC
GGCTTCGACA TGCAGGAGGC GACCAAGGCG ATGAGCTCGG TGTCCTCCTA TGTCATCGGC
ATCACCTCCG CCGAGGCCGG GTGGCTGATG GCGTTGCGCC GCCAGGGTTA CTCCGAGCGC
GAGTGGTACG AGAAGGTGGG CCCGCAGATG GCGGACTCGG CCATCGACCC GGCGTTGGCG
GAGGTCTACC TGGAGCAGCT GGCCAAGGAC CCCCGCGAGG CCCGCGCGGA GAACTTCGCT
TACGGACTCG ACCTCATGCT GGACAGCCTG CAGGCGCGGC TGACCGCGAA GCTCGCCGCC
GGCGTCACCG GCCCGGTGGA GACCGCCGCC AGTCAGTAG
 
Protein sequence
MESVDNDTDD SDPGFGSDSP APPLASVWTR PQRRQKEQLS RERIVAEAIA LLDADGIEAL 
SMRSLGQRLG AGATSLYRHV ANKDELIELV VDEVYGEMDV PEVTDPASWR LALHITAHSL
RRTGLRHMWL MSVLGQVGLN YLGPNVVDVT RRGLAIMTTA GFDMQEATKA MSSVSSYVIG
ITSAEAGWLM ALRRQGYSER EWYEKVGPQM ADSAIDPALA EVYLEQLAKD PREARAENFA
YGLDLMLDSL QARLTAKLAA GVTGPVETAA SQ