Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8885 |
Symbol | |
ID | 8340278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10294315 |
End bp | 10295160 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644961975 |
Product | ABC transporter related |
Protein accession | YP_003119539 |
Protein GI | 256397975 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGT TCGCCATCCA GACCGAGAGT CTCGGCAAGC GCTACCGGAA ACTGTGGGCG CTGAAGGACT TCAGCGTCTC GCTGCCCGCC AACAAGGTCA TCGCACTGGT CGGCGCGAAC GGCGCCGGCA AGTCCACGCT GATGTCCATC GCCGCCGGGA TCCTGCCGGC CAGCGAGGGC GAGCTCCGGG TCAACGGCCG CGTGGTGCTG CTGTCCCAGG AGAAGCCGCT CTACCGCTCG TTCACCGTCG CCGACATGCT CGCCTTCGGC AGGCATCTGA ACCGGGTCTG GGACCAGGAG CGCGCGCTGA ACTGGCTGGG CCGCTTCGAC ATCCCGCTGA ACCGGCCCTG CGGCAAGCTC TCCGGCGGCC AGCAGACGCA GGTCGCGATG GCCGTGGCGC TCGGCGCGCG GCCCTCGGTC CTGCTGCTCG ACGAGCCGCT GGCCAACCTG GACCCGCTGG CCCGCCGCGA GGTCACCGGC GAACTGCTCG CCGAGGTGGC CGACAGCGAC ATGACGGTCG TGCTGTCCAC CCATGTGGTG GCCGAGCTGG CCGGCGTCGG CGACTACCTG CTGCTGCTCG GGCAGGGCCG CGGCAAGCTC GACGGCGACG TCGAGGAGCT GCTGGCCCAG CACGCGCGGC TGACCGGCCC GCGCGCCGAC GCCCCGCCGG TCGAGGGCGA GATCGTGCAG GCGCAGCACA CCGAACGGCA GTCGACGTTC GTGATCCGCA CGCTGCTCGG CGCGGACACT CCGCTGGCCG AGCCGTGGAA GGCGCAGCCG CTGACTCTGG AGGACCTGGT GCTCGCCTAC CTGAAGCCGC ATCGCAGTCC CGGGGAGGAG CTGTGA
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Protein sequence | MSEFAIQTES LGKRYRKLWA LKDFSVSLPA NKVIALVGAN GAGKSTLMSI AAGILPASEG ELRVNGRVVL LSQEKPLYRS FTVADMLAFG RHLNRVWDQE RALNWLGRFD IPLNRPCGKL SGGQQTQVAM AVALGARPSV LLLDEPLANL DPLARREVTG ELLAEVADSD MTVVLSTHVV AELAGVGDYL LLLGQGRGKL DGDVEELLAQ HARLTGPRAD APPVEGEIVQ AQHTERQSTF VIRTLLGADT PLAEPWKAQP LTLEDLVLAY LKPHRSPGEE L
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