| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8875 |
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| Symbol | |
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| ID | 8340268 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10286460 |
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| End bp | 10287758 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961965 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003119529 |
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| Protein GI | 256397965 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGTGC CCGAGGAGAC CGCGGGTGGT TCCGACGTCG ACGCCCTCGA CGTCGGTGCC
GCCGTCGCGG CAGCGCACCG CGCGCACTGG GCCGCCGTCC TGGGCTCGAC CGTGCGCATC
ACTCGAGACC TCGACACCGC CGAGGAATGC GTGCAGGACG CCTACGCCCA GGCGCTGCGT
ACCTGGGCGT CGGCGGGCAT CCCGGACCGC CCGGACGCCT GGCTGCGCAC CGTGGCCGGG
AACCGGGCGC GCGACCTGCT GCGACGGGAG TCGGTGTGGC GGCGCGCGAT GCCGCTGCTC
GTCGAGGACG CCACCGTCCC GGACCCGCAG GACGCGGACG AATCCCCGGC CGTCGCCGAC
GACACCCTGC GCCTGATCTT CACCTGCTGC CACCCCGCGC TCTCCCGCGA AGCCCGCATC
GCCCTGACCC TGCGCCTGGT CTGCGGTCTG TCGACCGCCG AAGTCGCCCG CGCGTTCCTG
GTCCAGGAGA GCACCATGGC GGCGCGTATC ACTCGGGCCA AAAAGAAGAT CGCCACCGCG
CGCATCCCCT ATCGCGTGCC GACCGCTGCC GACCTTCCCG AACGGGTCTC AGCGGTCTGC
GACGTCGTGC ACCTGGTGTT CGCGACCGGC AGCAACGCCC CGGTCGGCGA GACGTTGATC
CGCGAGGACC TCGTCGCCTC CGCGGTCGGT CTGGCGCGCA CGTTGTATCG GTTGCTACCG
GTCCCCGAAT CCATCGGTCT GCTGGCGTTG CTGCTCCTGA TCGACGCTCG CCGCGCGACC
CGCGCCACGG AGGCTGGCGA TCCGATCCTG CTTGAGGATC AAGACCGTTC CTTGTGGGAC
CGCGCCATGA TCGCCGAAGG AGCGGACCTG CTGACCGAGG CTCTTCGCAG CGGTCCGCCG
ACCCGGTACG CGGTCCAGGC GGCGATCGCC GCCGCCCATG CGGAAGCGCC GAGTTTCGAA
GCCACGGACT GGGCAGAGAT CGTCGCGCTC TACGACGTCC TGCTCCGCTT GTGGCCCTCA
CCGGTCGTCG AACTCAACCG CGCTGTCGCC CTCGGAATGC GCGACGGTCC GCAGGCGGGT
CTTAGCGCTC TCGACCGCTT GGCCGCCGAA CCGACGCTGG CGACTTACCG GTATCTGAGC
GCTGCCCGAG CTGACTTTCT CAGAAGGCTG AAGAGGTGGC CGGAAGCCGC CACCGCCTAT
GAGGAAGCTC TGATGCTCAC CGACAACGAA GCCGAGCGTT CCTACCTCGC GATGCGCTTG
GCGACCATCT CATTCAAGCG GACCCAGGCC GGCGAGTAG
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| Protein sequence | MAVPEETAGG SDVDALDVGA AVAAAHRAHW AAVLGSTVRI TRDLDTAEEC VQDAYAQALR
TWASAGIPDR PDAWLRTVAG NRARDLLRRE SVWRRAMPLL VEDATVPDPQ DADESPAVAD
DTLRLIFTCC HPALSREARI ALTLRLVCGL STAEVARAFL VQESTMAARI TRAKKKIATA
RIPYRVPTAA DLPERVSAVC DVVHLVFATG SNAPVGETLI REDLVASAVG LARTLYRLLP
VPESIGLLAL LLLIDARRAT RATEAGDPIL LEDQDRSLWD RAMIAEGADL LTEALRSGPP
TRYAVQAAIA AAHAEAPSFE ATDWAEIVAL YDVLLRLWPS PVVELNRAVA LGMRDGPQAG
LSALDRLAAE PTLATYRYLS AARADFLRRL KRWPEAATAY EEALMLTDNE AERSYLAMRL
ATISFKRTQA GE
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