Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8870 |
Symbol | |
ID | 8340263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10282177 |
End bp | 10283073 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644961960 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003119524 |
Protein GI | 256397960 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGC GAACGTTGGA AGAGTCCGCG ACCGAGACCT TCGTCGCCCA CCGGAACCTG CTGTTCACGG TCGCCTACGA GATGCTCGGC TCGGCCGCCG ACGCCGAGGA CGTGCTGCAG GAGACCTGGC TGCGCTGGAC CACCGTCGAT CTGGACACGG TGCGGGACCG GCGCGCCTAC CTGGTGCGGA TCACGACCCG GCAGGCGCTG ACCCAGCTGC GCAAGCTCGG CCGGCGCAAG GAGTCCTACG TCGGGCCGTG GCTGCCCGAG CCGCTGCTGA CCACGCCGGA CGTCGCCGAG GACGTGGAGC TGGCCGACAG CGTCTCGATG GCGATGCTGC TGGTGATGGA GACGCTGACG CCCGCCGAGC GCGCGGTGTT CGTCCTGCGC GACGTGTTCA GCCTGGAGTA CGAGGAGATC GCCGAAGCGG TGGACAAGAC CCCGGCCGCG GTCCGGCAGA TCGCGCACCG GGCCCGCAAC CACGTCGCGG CTCGGCGGCC GCGCGGGGTG ACCTCCACCT CCGACGCCCG CTGCGCCACC GAGGCGTTTC AGAAAGCGGT GAACACCGGC GACCTGCAGA GCCTGTTCGA CCTGCTCGCC CCGGACGTCG TCTTCATCGG CGACGGCGGC GGCGTCGTGC AGGCCACGCC GCAGCCGCTC TACGGCATCG AGGTCGTGTC CCGGTTCATG GCCGACGGCC TGTCGCACCT GGGCGCCTTC GTCACCATGG AGACCGCGTA CGTCAACGGC GGTCTGGGGG TGATCATCCG GGCCGGCGGC GCGGTCGACA CGATCGTGGC GATGCACACC GAGAACGGTC TGATCACCGG AATCTATGTG GTCCGCAACC CCGAGAAGCT GTCGCGGGTC GAGGAGGAGA CCGCGATGTC ACGCTGA
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Protein sequence | MNERTLEESA TETFVAHRNL LFTVAYEMLG SAADAEDVLQ ETWLRWTTVD LDTVRDRRAY LVRITTRQAL TQLRKLGRRK ESYVGPWLPE PLLTTPDVAE DVELADSVSM AMLLVMETLT PAERAVFVLR DVFSLEYEEI AEAVDKTPAA VRQIAHRARN HVAARRPRGV TSTSDARCAT EAFQKAVNTG DLQSLFDLLA PDVVFIGDGG GVVQATPQPL YGIEVVSRFM ADGLSHLGAF VTMETAYVNG GLGVIIRAGG AVDTIVAMHT ENGLITGIYV VRNPEKLSRV EEETAMSR
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