| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8863 |
|---|
| Symbol | |
|---|
| ID | 8340256 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 10275944 |
|---|
| End bp | 10276792 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644961953 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_003119517 |
|---|
| Protein GI | 256397953 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAGC AGAATTGGCT CATCACCGGG GTCAGCAGCG GTCTCGGACG GGCCTTCGCG
CAGGCCGCGC TGGCCGCCGG GCACACCGTG GTCGGGACGG TCCGCTCGGA GGCGGACCTC
CGTGCCTTCG AGGCGCTCGA ACCCGGGCGG ACTCACGGCC GTGTTCTGGA TGTGACTGAC
AGCGGCGCCG TCTTGCGGAC GGTTGATGAA GTCGAGCATG ACGTCGGGCC GTTGGATGTG
GTTGTCGCGA ACGCCGGCTA CGGCTTGGAG GGGACGTTCG AGGAGACCCC GCTGGATGAG
GTTCGGCGGC AGTTCGAGGT CAACGTCTTC GGCGCGGTCG CCACGCTGCA AGCCGCTCTG
CCGCACATGC GCCGGCGGCG ACGCGGGCAT CTGATGGCCG TCACCTCGAT GGGTGGGCTC
GCAGCGTTCC CTGGTGTGTC CGCCTACTGC GGCAGCAAGT TCGCGCTGGA GGGAATCCTG
GAGTCGCTGG GCAAGGAAGT CGCACAGTTC GGGATCCGCG TCACCGCGAT CGAGCCCGGC
TCGTTCCGCA CCGACTGGGC CGGCCGGTCC ATGGTCCGGA CCGATCGCAC GATCGACGAC
TACGACGACC TGTTCGGTCC GCTCCGCGAA GCGCGCCAGC AGGCAAGCGG CAACCAGCTC
GGGAACCCTG CCAAGGCCGG GGAAGCGGTG GTCCGCATCG CCTCGGTCGA GAAGCCGCCG
TCCCATCTCG TCCTCGGCTC GGACGCGCTG CGTCTGGTCG GCGCGGCACG CTCCGCCGTC
GACGCGGACA TCCGCGACTG GGAGGAGCTG TCGCGCACGA CCGACTTCGC GGAGGGCGCA
CAGCTCTGA
|
|---|
| Protein sequence | MKQQNWLITG VSSGLGRAFA QAALAAGHTV VGTVRSEADL RAFEALEPGR THGRVLDVTD
SGAVLRTVDE VEHDVGPLDV VVANAGYGLE GTFEETPLDE VRRQFEVNVF GAVATLQAAL
PHMRRRRRGH LMAVTSMGGL AAFPGVSAYC GSKFALEGIL ESLGKEVAQF GIRVTAIEPG
SFRTDWAGRS MVRTDRTIDD YDDLFGPLRE ARQQASGNQL GNPAKAGEAV VRIASVEKPP
SHLVLGSDAL RLVGAARSAV DADIRDWEEL SRTTDFAEGA QL
|
|---|
| |