| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8860 |
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| Symbol | |
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| ID | 8340253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10273095 |
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| End bp | 10274276 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961950 |
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| Product | Colicin V production protein |
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| Protein accession | YP_003119514 |
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| Protein GI | 256397950 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATCC TCGACATCCT GCTGCTGCTG GTCGTGGCGG CGTTCGCGGT CTCTGGGTAC
CGGCAGGGCT TCGTCGTGGG CGTGGTCTCC TTCGCCGGCT TCCTCGGCGG TCTGGCGCTG
GGCTTCGTGA TCGTCCCGAC GTTCCTGGAC CGGTCCTCGG CGAGCCTGCT GGCCTCGGTG
ATAGCGCTGT GCGCGGTGCT GGCGCTGGCG GTGGTCGGGC AGGTGCTCGG CTCGATGCTG
GGCGCCAAGC TGCGCGAGGC CATCACCTGG CAGCCGGCGC AGATGGTGGA CGCGGTCAGC
GGTGCGGTGG TGTCGGTGAT CGCGGTGCTG ATGGTCGCGT GGTTCCTGGG GCTGGCGCTG
TTCACGTCCT CGGTGCCGAC CATCAGCGAC CAGGTGCGCT CCTCCAGCAT CCTCAAGGGC
ATGACCCAGG TGCTGCCGCA GGGCGCCAAC CAGTGGTTCA GCTCGTTCTC CAACGTCCTG
AACCGCAACG GCTTCCCGCA GGTGTTCGCG CCCTTCCAGG CCGAGGACCC GGCGAACGTG
CCGCCGCCGG ACCCGGCGCT GCTGAACAGC CCGGTGATCG CCGCCGACCG GGCCTCGATC
GTGAAGATCC GCGGCCAGGC GCCCTCGTGC GGCAAGGACA TCGAGGGCTC CGGATTCGTC
TACGCCTCCG GCAAGGTGAT GACCAACGCG CACGTGGTCG GCGGTACGCG CTCGCTGGTC
GTGCGCCAGT CCAACGGCAA GCAGTACGCG GCCACCGTGG TGCTGTTCGA CCCCAAGCGG
GACATCGCCG TCCTGGACGT CCCCAGCCTG AAGGCGCCGC AGCTGAACTT CGACCTCGGC
GGCAAGGCCA ACGACTCCTC GCTGGTGGTC GGCTACCCCG AGGACGGCCC GTTCACCGTC
GACGCCGCGC GCATCCGCGA GCAGATCACG GCGACCGGCG CCGACATCTA CTCCAACGGC
AACGTCCGCC GGCAGGTGTT CGCCCTCTAC GCGCAGGTGC AGCAGGGCAA CTCCGGCGGC
CCGCTGCTGT CCACGGACGG CCGGGTGCTC GGCGTGGTCT TCGCCAAGTC GCTGGAGGAC
AAGAACACCG GCTACGCGCT GACCGCGCAG GAGGTCTCCT CCGACGCGCA GGCCGGCGCC
GCGACCGACG TCCCGGTCAA CACCCAGGCC TGCGCGATCT GA
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| Protein sequence | MDILDILLLL VVAAFAVSGY RQGFVVGVVS FAGFLGGLAL GFVIVPTFLD RSSASLLASV
IALCAVLALA VVGQVLGSML GAKLREAITW QPAQMVDAVS GAVVSVIAVL MVAWFLGLAL
FTSSVPTISD QVRSSSILKG MTQVLPQGAN QWFSSFSNVL NRNGFPQVFA PFQAEDPANV
PPPDPALLNS PVIAADRASI VKIRGQAPSC GKDIEGSGFV YASGKVMTNA HVVGGTRSLV
VRQSNGKQYA ATVVLFDPKR DIAVLDVPSL KAPQLNFDLG GKANDSSLVV GYPEDGPFTV
DAARIREQIT ATGADIYSNG NVRRQVFALY AQVQQGNSGG PLLSTDGRVL GVVFAKSLED
KNTGYALTAQ EVSSDAQAGA ATDVPVNTQA CAI
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