Gene Caci_8856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8856 
Symbol 
ID8340249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10269017 
End bp10269847 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content74% 
IMG OID644961946 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003119510 
Protein GI256397946 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.760291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG TATCGGAGAA GGATTACAAC GGCGTACTCC TGCGGCGGCA CCCGGCGTTC 
GGCAACGGCG TGGTCGCGGA GATCGTGCTG AACCGCGGGG CGGCGATGAA CGCGATCTCG
ACCGGCATGG CGGCGGCGAT CCGCGACGTC GGGACGGAGC TGGCCGAGGA CCCGGCGGTG
CGCGCGGTCG TGGTGTCGGC GGTGCCGCCG GTGGTCGAGG GGAAGAACCA CGCGTTCTGC
GTCGGCGTGG ACCTCAAGGA GCGCGACCGC ATGACCGACG CCGAGCTGGT CGCCACCCGG
CCGGCGTTCC GGCGGACCTG GGGCACGTTC GGTTCGCTGC CGATGCCGGT CGTCGCCGCG
GTCTCCGGCT ACGCCCTCGG CGGCGGCTGC GAGCTGGCGC TGGCCTGCGA TCTCATCGTC
GCCGACGACG GCGCGGTGTT CGGATTGCCG GAGGTGTCGG TCGGCGTCAT CCCCGGCGGC
GGCGGGACGC AGACGCTGGT GCGGCGCGTG GGCATGAACC GCGCCGCGGA CCTGATCTTC
ACCGCGCGGC GCGTCGACGC CGACGAGGCC GACCGCTTCG GCATGATCGA CCGGCGGGTC
GCGGGCAGTT CGACGGCGCG CGGGGCGGCG CTGGAGCTGG CGCAGCAGAT CGCGAAGAAC
TCGCCGATCG GCGTGCGCAA CGCCAAGCAC GCGCTGAAGG TCGGCGCGGA TCTGCCGCTG
GCCGCCGGGC TGGATGTGGA GGACGGCGCG TGGCGCGCGA CGGCGTTCTC GGCGGACCGG
GCCGAGGGCG TACGGGCCTT CGTGGAGAAG CGGGCGCCGA TCTGGCCGTG A
 
Protein sequence
MSEVSEKDYN GVLLRRHPAF GNGVVAEIVL NRGAAMNAIS TGMAAAIRDV GTELAEDPAV 
RAVVVSAVPP VVEGKNHAFC VGVDLKERDR MTDAELVATR PAFRRTWGTF GSLPMPVVAA
VSGYALGGGC ELALACDLIV ADDGAVFGLP EVSVGVIPGG GGTQTLVRRV GMNRAADLIF
TARRVDADEA DRFGMIDRRV AGSSTARGAA LELAQQIAKN SPIGVRNAKH ALKVGADLPL
AAGLDVEDGA WRATAFSADR AEGVRAFVEK RAPIWP