Gene Caci_8853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8853 
Symbol 
ID8340246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10265527 
End bp10266321 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content70% 
IMG OID644961943 
ProductABC transporter related 
Protein accessionYP_003119507 
Protein GI256397943 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0889132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGG TCAAGGCCGC CGGGGTGCGG GTGGTGCTGG ACCACAAGCC GATCCTGCAC 
GGCGTCGACC TCGCCGTGGG CTCCGGTTCC TGGCACGCGG TGCTCGGTCC GAACGGCGCG
GGCAAGTCCA CGCTGCTCAA GGCGATCGTC GGAATCCTTG CCTACCAAGG GGAAATCCGC
GTCGGCGGCG AATCGGTCGC GAAGCTGCCC GCCAAACACC GCGCGCGCCT CATCGCCTAC
GTGCCGCAGC AGCCGCAGCT CCCCGGCGAC ATGACCGTCG CCGAATACGT CCTGCTCGGC
CGTACTCCGC ACCTGGGCTA CCTCGGCGTC GAGTCCCGGT CCGACCGGGC CATCGCCGAG
AGTGCGCTGG AGCGCCTCGA CCTCGCCGGA TTCGCCCACC GGAGGCTCGG CACGATGTCC
GGCGGCGAAC GCCAGCGCGT CGTCCTGGCC CGCGCCCTCG CGCAGCAAGC CGGCGTCCTG
CTCCTCGACG AGCCGACCAC CGCCCTCGAC CTCGGCCACC AGCAACAGGT CCTGGACCTG
GTCGACGAAC TGCGCGCGAC CGAGGGCCTG ACCGTGATCA GCACTCTGCA CGACCTCAGC
CTCGCCGCGC AGTACGCCGA CGAGCTCACC CTCCTCGTCG GCGGCGCCGT CGTCGCCACC
GGCACGGCGC GCGAAGTGCT GACGGAGCAA CGGATTTCCG AGCACTACGG AGCCCGGGTC
AAAGTTCTCG ATGACGGCGA AGGGCGACCG GTCATCCACC TTGTCCGCAG GACACACCAG
CGCCAAGGCG AATAA
 
Protein sequence
MSAVKAAGVR VVLDHKPILH GVDLAVGSGS WHAVLGPNGA GKSTLLKAIV GILAYQGEIR 
VGGESVAKLP AKHRARLIAY VPQQPQLPGD MTVAEYVLLG RTPHLGYLGV ESRSDRAIAE
SALERLDLAG FAHRRLGTMS GGERQRVVLA RALAQQAGVL LLDEPTTALD LGHQQQVLDL
VDELRATEGL TVISTLHDLS LAAQYADELT LLVGGAVVAT GTAREVLTEQ RISEHYGARV
KVLDDGEGRP VIHLVRRTHQ RQGE