Gene Caci_8844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8844 
Symbol 
ID8340237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10253994 
End bp10256288 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content73% 
IMG OID644961934 
Productheavy metal translocating P-type ATPase 
Protein accessionYP_003119498 
Protein GI256397934 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2217] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGA CCTTGGAGGC GGCGGCCGGA TCCGGCGCCC GGAACGACGT CGAGTTGGCG 
ATCGGCGGCA TGACCTGTGC CTCGTGCGCC TCGCGGATCG AGCGCAAGCT GAACAAGCTC
GACGGCGTCA CCGCGACCGT GAACTACGCC ACCGAGAAGG CGAAGGTCAG CTTCCCGGCG
GACTACGCGC CGGCGGACCT GGTCGCCGTG GTCGAGGCGG CCGGCTACAC CGCCGCGCTG
CCCGAGCCGC CAGCTCCGGT CGGACCGGCG TCCGCCGACG GCGAACCGCC CAAGAGCGCC
GCGGAACTGG AGGACGAGCG CCGCGCCGTT TCGCTGCGGC AGCGCCTGAC CACCGCGGTC
GTGCTGTCCG TACCAGTGGT CCTGATGGCG ATGATCCCGG CCCTGCAGTT CCGCAACTGG
CAGTGGGCCT CCCTGACGCT GTCCGCGCCG GTGGTCACCT ATGCCGCCTG GCCGTTCCAC
AAGGCCGCCT GGACCAACCT GAGGCACCGC GCCGCCACGA TGGACACGCT GGTGTCCGTC
GGCGTCTCAG CGGCCTTCCT GTGGTCGCTG TGGGCGCTGT TCTTCGGCGA CGCCGGGATG
CCTGGGATGA AGCACGGCTT CGACTTCGCC GTCTCCCGCA CTGACGGCTC CGGGTCGATC
TACCTGGAGG CGGCCTCGGG CGTGACCGCG TTCATCCTGG CCGGACGGTA TTTCGAGCAC
AAGGCGAAGC GGCGCTCCGG CGCGGCTCTG CGGGCCCTGA TGACGCTCGG GGCGAAGGAC
GTCGCAGTAC TGCGCGGCGG CGCCGAGGTG CGGATCCCGA TCGGCGAGCT GGCCGTCGGC
GACCTCTTCG TGGTGCGGCC CGGGGAGAAG GTGGCGACCG ACGGCGTGGT CGAGCAGGGC
CGCTCGGCGG TCGACGCCTC GATGCTCACC GGCGAGTCGG TCCCGGTGGA CGTCGCGCCC
GGCGCGGCCG TCACCGGCGC GACGGTGAAC ACCTCCGGCC GCCTGGTGGT GCGCGCGACG
AGGGTCGGCG CCGACACCCA GCTGTCCCGG ATGGCGAAGC TGGTCGAGGA GGCGCAGAAC
GGCAAGGCCG CTGCGCAGCG GCTGGCGGAC AAGATCTCCG CGGTCTTCGT CCCGACCGTG
ATCCTGCTGT CCCTGGCGAC GCTGGCCTTC TGGCTGCTGG TCGGCAGCCA GGAGGCCGGC
GTCGCGACGG CGTTCGCGGC GGCCGTCAGC GTCCTGATCA TCGCCTGCCC CTGTGCCCTG
GGCCTGGCCA CCCCGACCGC GCTGATGGTC GGTACCGGCC GCGGCGCGCA GCTGGGAATC
CTGATCAAGG GTCCGGAGGC GCTGGAGAAC ACCCGCCGCG TGGACACCAT CGTGCTCGAC
AAGACCGGCA CCGTGACCAC CGGCTCGATG GCTCTGGTCG GCATCACCGT CGCCGAGGGC
GAGTCCGAGG ACGAGGCGCT GCGCCTGGCC GGGGCGCTGG AGCAGGCCAG CGAGCACCCG
ATCGCCAAGG CGGTCGCGGC CGCCGCCGCC GAGCGGACCG GGGCGCTGCC GGCGGTCGAA
GGGTTCGAGA ACGTCGAGGG CTTGGGCGTG CAGGGCGTGG TGGACGGACA CGCGGTCGTG
GTCGGCCGGG AGAAGCTGCT GGCCGAATGG GCCCAGCACC TGAGCCCGGA GCTGGCCGCG
GCCAAGGCCG GCGCCGAGGC GGCGGGCCGC ACCGCGATCG CGGTCGGCTG GGACGGCCGG
GCCCGGGCCG TGCTGGCGGT CGCCGACGCG GTGAAGCCGA CCAGCGCCGA GGCGGTCCGC
GAGCTGCGTG CCCTGGGTCT GACCCCGGTC CTGCTCACCG GCGACAACGA GACCGTGGCG
CGCGCGGTGG CCGCCGAGGT CGGGATCGAG GAGGTGCTGG CCGAGGTGCT GCCGCTGGGC
AAGGTCGAGG CGGTCAGGCG GCTGCAGGCC GAAGGCCGCG TGGTCGCGAT GGCCGGCGAC
GGCGTGAACG ACGCCGCCGC CCTGGCCCAG GCCGACCTGG GCCTGGCCCT GGGCACCGGC
ACCGATGCCG CGATCGAGGC CGGCGACCTG ACCCTGGTCG GCGGCGACCT GCGCACCGCG
GCCACCGCGA TCCGCCTGTC CCGCCGCACC CTGGCCATCA TCAAGGGAAA CCTGTTCTGG
GCCTTCGGCT ACAACGTGGC AGCCCTGCCG CTGGCCGCCG CCGGACTGCT GAACCCGATG
ATCGCCGGCG CGGCGATGGC CTTCTCCTCG GTGTTCGTGG TGAGCAACAG CCTGCGGCTG
CGGCGGTTCC ACTAG
 
Protein sequence
MAETLEAAAG SGARNDVELA IGGMTCASCA SRIERKLNKL DGVTATVNYA TEKAKVSFPA 
DYAPADLVAV VEAAGYTAAL PEPPAPVGPA SADGEPPKSA AELEDERRAV SLRQRLTTAV
VLSVPVVLMA MIPALQFRNW QWASLTLSAP VVTYAAWPFH KAAWTNLRHR AATMDTLVSV
GVSAAFLWSL WALFFGDAGM PGMKHGFDFA VSRTDGSGSI YLEAASGVTA FILAGRYFEH
KAKRRSGAAL RALMTLGAKD VAVLRGGAEV RIPIGELAVG DLFVVRPGEK VATDGVVEQG
RSAVDASMLT GESVPVDVAP GAAVTGATVN TSGRLVVRAT RVGADTQLSR MAKLVEEAQN
GKAAAQRLAD KISAVFVPTV ILLSLATLAF WLLVGSQEAG VATAFAAAVS VLIIACPCAL
GLATPTALMV GTGRGAQLGI LIKGPEALEN TRRVDTIVLD KTGTVTTGSM ALVGITVAEG
ESEDEALRLA GALEQASEHP IAKAVAAAAA ERTGALPAVE GFENVEGLGV QGVVDGHAVV
VGREKLLAEW AQHLSPELAA AKAGAEAAGR TAIAVGWDGR ARAVLAVADA VKPTSAEAVR
ELRALGLTPV LLTGDNETVA RAVAAEVGIE EVLAEVLPLG KVEAVRRLQA EGRVVAMAGD
GVNDAAALAQ ADLGLALGTG TDAAIEAGDL TLVGGDLRTA ATAIRLSRRT LAIIKGNLFW
AFGYNVAALP LAAAGLLNPM IAGAAMAFSS VFVVSNSLRL RRFH