Gene Caci_8837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8837 
Symbol 
ID8340230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10242178 
End bp10244199 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content73% 
IMG OID644961927 
Producthypothetical protein 
Protein accessionYP_003119491 
Protein GI256397927 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2247] Putative cell wall-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACT CTGTTCTGCG CCGGCCGCTG GCGCTCACCG CGACGCTGGC CACGTCCGTC 
GCCGCGGCCG CCGGGCTCAT CGCCCCCGCC GCGAACGCCA CGACCACGAG TCCGAACGGC
ACGGCCAGCC TCACGGTCTC CGGGGGCAGT TCCGCGGCGC CGTCGGGGAC CAGCACCGTC
ACCGGGACCA AGTACGCGCT CGGCTTCGCC CCGGCGGCGG CGAACCTCGC GTGGGCGCCG
ACCGGCGCGC GGGCCGCGTG GATCGACCCG GCGTCCGGCG CGGTCGTGGC CGGCGTCCCG
GGCGGCGCGG CCGAGGTGAT CGCCCCCGCG CCGGCTTCCG GCACCGCGCG CTCGCACCCG
GCGTGGATCG ACGGCGGCTC GGCGGTGGTG TGGTCGGAGA AGGCGGCCGG CAAGAACGCG
GTCCTGAACT GGGCCTACGG CAACGGTGTT CAGGGCTCCG GAGGCGCACC GACCGTCCAG
ACTCTGCGCA CCCTGAGCGG TAGCGATCTG TCCCACCCCG ATTCGGTGGG CTCGCTGCTG
GTCTACCAGG TGAACACGCC GAACAAGGCG CCGCAGATCT ACCTGTGGAA CCGCGCGCAG
GCGAACTCGG CGCCGGTGCT GATCGCGACC GGCTGGGACC CCTCGATCTC GGCGGACGGC
ACGCACGTCG CCTTCGTCAC CACCACCGCC AGCCCGGCCG GCACCAACGT CTACACCGTC
GCGCTGAGCA ACCCGTCCGG CACGCTGAAC CAGGTGACGG CGGGCGGCGG CGGGTTCGCG
AACCCGGTGT ACACGCCGAA CGGCACCGGC CTGGTCTTCG AGCGGCTGGA CGGCACCGGC
AAGGACGTCG ACACGCTGTC CGTCGCGGCC GGCGCCGCCA AGAGCGCCGC GTACACCGAG
ATCGTCCCGG GCACGAAGAT CCTCGGGCAG CCGGCGTTCC GGCCGGTCGT CCAGGACAGC
GTGACCCGCA TCGCCGGCGG CGACCGTCTG GGCACCGCGA TCAAGGTCTC CCAGTCCCGT
TGGTCCTCCG CGGGCGTCGC GAAATCCCCG GGCGTGGCGG CGAAGGCGGT CGTGCTCACG
CGCTCCGACC AGTTCGCCGA CGCCCTCGGC GGCTCGGCGC TGGCCGCGAA GGTCGGCGGC
CCGCTGTTGC TGACCCAGAC CGCCGGGCTG GACCCGGCGG TGAAGGCGGA GATCCAGCGG
GTACTGGGTC CCGGCGACGG GGTGAAGACC GTCTACGTCC TCGGCGGTAC TCAGGCGCTG
TCGCCGGGCG TGGCGAACGC GCTGACCGCG CTGCACTACA AGGTGCAGCG GATCTCTGGA
CAGGACCGGT TCTCCACCGC TGTGGCGATC GCCGGCACCA TCACCGGCCC GAACGCCGCC
CCGGACTACA TCCTGGTGGC CACCGGCGAG AACTTCCCCG ACGCGCTGTC CGCCGGCGCC
GCCGCCGGTG CGATCGACGC GCATCAGGGC AAGAACGCGG TCGTGCTGCT CACCAACGAC
ACGGTGATGC CCAAGCCGAC GATCGACTAC CTGGCGCCGC TGCTCGGCCG CACCAACCTG
AACCCTGACC CGCAGCACAC GAAGCCGGCG AACTTCATCG AGCTGGACAG CATCGGCAAG
CAGGCCAAGA CCGCGCTGGA TTCGCACTGG ATCCCGGCGG GCGGGCAGGG CGGTTCCTTC
CTCGGCCTGT GGGGCGGGGA CCGGTACGTG ACCTCGGCGT TGGTCGCGCG GTACTTCTTC
GGCGCCGCGA GCTCGGTCGG TGTCGCGACC GGGATGAACT GGGCCGACGC GCTGTCCGGC
GGCGCCGAGA TGGGGATGGA GAACGGCCCG CTGCTGCTGG TCGATCCGAA GGCCGGGGTG
CCGGCCGGCG CGGCGCAGTG GCTGAACCAG GATAGCGGGC AGCTCCAACG CGCCGAAATC
TTCGGTGGAA CGGTTGCGGT GCCTCAGAGC GTCGACAAGG TGGTGGGCGG TCTGATCGCC
GGGACCGGCG GGGTCGTCTA CGCGTCGAAC CCGGTGGGCT GA
 
Protein sequence
MTDSVLRRPL ALTATLATSV AAAAGLIAPA ANATTTSPNG TASLTVSGGS SAAPSGTSTV 
TGTKYALGFA PAAANLAWAP TGARAAWIDP ASGAVVAGVP GGAAEVIAPA PASGTARSHP
AWIDGGSAVV WSEKAAGKNA VLNWAYGNGV QGSGGAPTVQ TLRTLSGSDL SHPDSVGSLL
VYQVNTPNKA PQIYLWNRAQ ANSAPVLIAT GWDPSISADG THVAFVTTTA SPAGTNVYTV
ALSNPSGTLN QVTAGGGGFA NPVYTPNGTG LVFERLDGTG KDVDTLSVAA GAAKSAAYTE
IVPGTKILGQ PAFRPVVQDS VTRIAGGDRL GTAIKVSQSR WSSAGVAKSP GVAAKAVVLT
RSDQFADALG GSALAAKVGG PLLLTQTAGL DPAVKAEIQR VLGPGDGVKT VYVLGGTQAL
SPGVANALTA LHYKVQRISG QDRFSTAVAI AGTITGPNAA PDYILVATGE NFPDALSAGA
AAGAIDAHQG KNAVVLLTND TVMPKPTIDY LAPLLGRTNL NPDPQHTKPA NFIELDSIGK
QAKTALDSHW IPAGGQGGSF LGLWGGDRYV TSALVARYFF GAASSVGVAT GMNWADALSG
GAEMGMENGP LLLVDPKAGV PAGAAQWLNQ DSGQLQRAEI FGGTVAVPQS VDKVVGGLIA
GTGGVVYASN PVG