Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8837 |
Symbol | |
ID | 8340230 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 10242178 |
End bp | 10244199 |
Gene Length | 2022 bp |
Protein Length | 673 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644961927 |
Product | hypothetical protein |
Protein accession | YP_003119491 |
Protein GI | 256397927 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2247] Putative cell wall-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT CTGTTCTGCG CCGGCCGCTG GCGCTCACCG CGACGCTGGC CACGTCCGTC GCCGCGGCCG CCGGGCTCAT CGCCCCCGCC GCGAACGCCA CGACCACGAG TCCGAACGGC ACGGCCAGCC TCACGGTCTC CGGGGGCAGT TCCGCGGCGC CGTCGGGGAC CAGCACCGTC ACCGGGACCA AGTACGCGCT CGGCTTCGCC CCGGCGGCGG CGAACCTCGC GTGGGCGCCG ACCGGCGCGC GGGCCGCGTG GATCGACCCG GCGTCCGGCG CGGTCGTGGC CGGCGTCCCG GGCGGCGCGG CCGAGGTGAT CGCCCCCGCG CCGGCTTCCG GCACCGCGCG CTCGCACCCG GCGTGGATCG ACGGCGGCTC GGCGGTGGTG TGGTCGGAGA AGGCGGCCGG CAAGAACGCG GTCCTGAACT GGGCCTACGG CAACGGTGTT CAGGGCTCCG GAGGCGCACC GACCGTCCAG ACTCTGCGCA CCCTGAGCGG TAGCGATCTG TCCCACCCCG ATTCGGTGGG CTCGCTGCTG GTCTACCAGG TGAACACGCC GAACAAGGCG CCGCAGATCT ACCTGTGGAA CCGCGCGCAG GCGAACTCGG CGCCGGTGCT GATCGCGACC GGCTGGGACC CCTCGATCTC GGCGGACGGC ACGCACGTCG CCTTCGTCAC CACCACCGCC AGCCCGGCCG GCACCAACGT CTACACCGTC GCGCTGAGCA ACCCGTCCGG CACGCTGAAC CAGGTGACGG CGGGCGGCGG CGGGTTCGCG AACCCGGTGT ACACGCCGAA CGGCACCGGC CTGGTCTTCG AGCGGCTGGA CGGCACCGGC AAGGACGTCG ACACGCTGTC CGTCGCGGCC GGCGCCGCCA AGAGCGCCGC GTACACCGAG ATCGTCCCGG GCACGAAGAT CCTCGGGCAG CCGGCGTTCC GGCCGGTCGT CCAGGACAGC GTGACCCGCA TCGCCGGCGG CGACCGTCTG GGCACCGCGA TCAAGGTCTC CCAGTCCCGT TGGTCCTCCG CGGGCGTCGC GAAATCCCCG GGCGTGGCGG CGAAGGCGGT CGTGCTCACG CGCTCCGACC AGTTCGCCGA CGCCCTCGGC GGCTCGGCGC TGGCCGCGAA GGTCGGCGGC CCGCTGTTGC TGACCCAGAC CGCCGGGCTG GACCCGGCGG TGAAGGCGGA GATCCAGCGG GTACTGGGTC CCGGCGACGG GGTGAAGACC GTCTACGTCC TCGGCGGTAC TCAGGCGCTG TCGCCGGGCG TGGCGAACGC GCTGACCGCG CTGCACTACA AGGTGCAGCG GATCTCTGGA CAGGACCGGT TCTCCACCGC TGTGGCGATC GCCGGCACCA TCACCGGCCC GAACGCCGCC CCGGACTACA TCCTGGTGGC CACCGGCGAG AACTTCCCCG ACGCGCTGTC CGCCGGCGCC GCCGCCGGTG CGATCGACGC GCATCAGGGC AAGAACGCGG TCGTGCTGCT CACCAACGAC ACGGTGATGC CCAAGCCGAC GATCGACTAC CTGGCGCCGC TGCTCGGCCG CACCAACCTG AACCCTGACC CGCAGCACAC GAAGCCGGCG AACTTCATCG AGCTGGACAG CATCGGCAAG CAGGCCAAGA CCGCGCTGGA TTCGCACTGG ATCCCGGCGG GCGGGCAGGG CGGTTCCTTC CTCGGCCTGT GGGGCGGGGA CCGGTACGTG ACCTCGGCGT TGGTCGCGCG GTACTTCTTC GGCGCCGCGA GCTCGGTCGG TGTCGCGACC GGGATGAACT GGGCCGACGC GCTGTCCGGC GGCGCCGAGA TGGGGATGGA GAACGGCCCG CTGCTGCTGG TCGATCCGAA GGCCGGGGTG CCGGCCGGCG CGGCGCAGTG GCTGAACCAG GATAGCGGGC AGCTCCAACG CGCCGAAATC TTCGGTGGAA CGGTTGCGGT GCCTCAGAGC GTCGACAAGG TGGTGGGCGG TCTGATCGCC GGGACCGGCG GGGTCGTCTA CGCGTCGAAC CCGGTGGGCT GA
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Protein sequence | MTDSVLRRPL ALTATLATSV AAAAGLIAPA ANATTTSPNG TASLTVSGGS SAAPSGTSTV TGTKYALGFA PAAANLAWAP TGARAAWIDP ASGAVVAGVP GGAAEVIAPA PASGTARSHP AWIDGGSAVV WSEKAAGKNA VLNWAYGNGV QGSGGAPTVQ TLRTLSGSDL SHPDSVGSLL VYQVNTPNKA PQIYLWNRAQ ANSAPVLIAT GWDPSISADG THVAFVTTTA SPAGTNVYTV ALSNPSGTLN QVTAGGGGFA NPVYTPNGTG LVFERLDGTG KDVDTLSVAA GAAKSAAYTE IVPGTKILGQ PAFRPVVQDS VTRIAGGDRL GTAIKVSQSR WSSAGVAKSP GVAAKAVVLT RSDQFADALG GSALAAKVGG PLLLTQTAGL DPAVKAEIQR VLGPGDGVKT VYVLGGTQAL SPGVANALTA LHYKVQRISG QDRFSTAVAI AGTITGPNAA PDYILVATGE NFPDALSAGA AAGAIDAHQG KNAVVLLTND TVMPKPTIDY LAPLLGRTNL NPDPQHTKPA NFIELDSIGK QAKTALDSHW IPAGGQGGSF LGLWGGDRYV TSALVARYFF GAASSVGVAT GMNWADALSG GAEMGMENGP LLLVDPKAGV PAGAAQWLNQ DSGQLQRAEI FGGTVAVPQS VDKVVGGLIA GTGGVVYASN PVG
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