| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8833 |
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| Symbol | |
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| ID | 8340226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10236592 |
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| End bp | 10238505 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961923 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_003119487 |
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| Protein GI | 256397923 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.756263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTACG CCGGTCTCGC ACTCAACGGG CTGGCGATCG GGTGCGTGGC GGCGCTGGCC
GCGGTCGGGC TGCTGGCGAC CTATCGGGTG ACCGGCGTGT TCAACATCGC CTTCGGCTCC
AACGCGGTGT TCTGCGCCTA CGTGATGTGG CAGTGCGTGC GGGTGTGGCA CCTGCCGGTC
GGCGTGGCCG CCGTGCTGGT GCTGGGGATC GTGGCGCCGG GGATCGGGCT GGTGCTGGAG
CGGCTGGTCT ACCGGCCGTT GCGGCGCAGC GGGGCTTCGG GGCTGCTGGT GGCGACGCTC
GGCGTGCTGG TGTTGCAGCT CGGGCTGGTC TTCCTGCTGT GGGGCGGGCG TTCCTACGTC
GACGCGCCCT CGTTGCTGCC CGCCGGATCG GTGCGGCTGA CCGGATCGCT GACACTGTCC
TACGCCACCA TCGTCGAACT CTGCGTTGTC GTGCTGATCG CGGCGCTGCT GACGTTCCTG
TTGCGCGCCA CGCGGGTCGG CCTGATGGTG CGCGCCGTGG TGGACGACCG GGATCTGGCC
GACTCGCTGC TGCCCGCCGA CCGGCTCGCC GCCGGCGGCT GGGCGTTCGG GTCGTTCCTG
GCGGGGGTCG CCGGCGTGCT GTGGGCGCCG ATCTACCACT TGGACCCGTA CAGCCTGACG
CTGACCGTGC TGGAGACGAT GGGCGTCGCG GTGCTGGCCC GGCTGACATC GCTGCCGGTC
GCGGTCCTCG CCGCGCTGGC GATCGGGATC GGGCAGACCG AGCTGACCGC GGTGCATCCG
GCGGCCCGGT GGCAAGGGCT GGTCGACGCG TTCCACACGA ACCTGTTCGT CCTGGTGCTG
TTCGCGGCGT TGATGGTCGT GCCCCGCTTG GGAATCCGCG ATTCCGAATC GGTCGGCGCG
GGATTGCATC GCGCCGGCGC GCGGCGGACT TCGAGCCCTG ACATGGTCAG CCGGCTGCCG
TTCGGTGCGC TGTCCTTGGT CTTGGCGCTG CCGTTGTTCT TCGATCCGGC CGATCTGCGC
GCCTCGCTGG CGGTTCCGGC GTTGGCGGTG GTGTTCGTGT CGCTGGTGGT CGCGACGGGC
TATGCCGGGC AGATCTCGTT GGGGCAGGCG GGTTACGCCG GGCTCGGCGC GCTGTTCATG
GCGAAGCTGG CCGAGGCGGG GGTGCCGTGG CTCGTGGCGT TGTTCCTCGG TCCGCTGCTG
GTGGTGCCGT TGGGCTGGCT CACCGGATAT CCGGCGATCC ACCGGCGCGG GCTCTATCTG
GCGCTGACGA CCTTCGCCAC AGCCGCCGTC GTCGCGCGGT TCGTCTTCGC GCAGCCGGTG
TTCGTCGGCG GGCTGGTGGT CGCACGGCCG CCCGGCTTCA CCGACGATCA CTGGTTCTAC
GCCCTGGAAC TCGCCTGCTT GCTGCTCGCG CTGCTGCTGG TCCGCTCGCT GCACACCGGT
CCGATGGGGC GCGCGCTGGG GGCGCTGCGC GATTCGGAGG CGGCTGCGGT CTCCGCGGGG
ATCGATGTGC GGCGCATGAA GGTGTTCGTG TTCGCGTGCG CGGCGGGACT CGCCGGTCTC
GGCGGCGCGC TGACGACGTC CGCCGCGCAG GCGTTCAACC CGACGGACTT CGACCCGGTG
CAAGGGCTGG TGTGGTTCGC GGCGGTCGCG GTGTGGGGCG TGGACTCGGC GATGGGCGCC
GTGGTCGGGG CGGCCGCGCT GGTGGCGGTC GACGTCGGGA CCGTGGTGGG GGTCTCCGGG
CTGCTGATCG GGATCGGGGC GGTGGCGCTG GGGCGGTTCC CGGGCGGGAT CGGCGCGGCG
GTACGGCGTG CGGGGGACTG GCTGGCGCGG CCGCTGGAGC GTCCGGCGAG CAGGCGGCTG
AGCCCGGCGG GGCATGCGGT GGCGGCGCGG GTGCGGGAAC GGCGGGTGTC GTGA
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| Protein sequence | MFYAGLALNG LAIGCVAALA AVGLLATYRV TGVFNIAFGS NAVFCAYVMW QCVRVWHLPV
GVAAVLVLGI VAPGIGLVLE RLVYRPLRRS GASGLLVATL GVLVLQLGLV FLLWGGRSYV
DAPSLLPAGS VRLTGSLTLS YATIVELCVV VLIAALLTFL LRATRVGLMV RAVVDDRDLA
DSLLPADRLA AGGWAFGSFL AGVAGVLWAP IYHLDPYSLT LTVLETMGVA VLARLTSLPV
AVLAALAIGI GQTELTAVHP AARWQGLVDA FHTNLFVLVL FAALMVVPRL GIRDSESVGA
GLHRAGARRT SSPDMVSRLP FGALSLVLAL PLFFDPADLR ASLAVPALAV VFVSLVVATG
YAGQISLGQA GYAGLGALFM AKLAEAGVPW LVALFLGPLL VVPLGWLTGY PAIHRRGLYL
ALTTFATAAV VARFVFAQPV FVGGLVVARP PGFTDDHWFY ALELACLLLA LLLVRSLHTG
PMGRALGALR DSEAAAVSAG IDVRRMKVFV FACAAGLAGL GGALTTSAAQ AFNPTDFDPV
QGLVWFAAVA VWGVDSAMGA VVGAAALVAV DVGTVVGVSG LLIGIGAVAL GRFPGGIGAA
VRRAGDWLAR PLERPASRRL SPAGHAVAAR VRERRVS
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