| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8826 |
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| Symbol | |
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| ID | 8340219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 10230806 |
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| End bp | 10231495 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644961916 |
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| Product | sortase family protein |
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| Protein accession | YP_003119480 |
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| Protein GI | 256397916 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.457222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGAGGG CAGGGGCGCT TCTGCGTATT GCGATACGGA CCGTCGGCGA GCTACTGGTC
ACGTCCTCCG TGCTGTTGGC GCTGTTCATC GTGTATCAGC TCTATTACAC GAACGTGGTC
GGCCGCCATG TGATGAACCA GGAAGTGAAT GACATCCACA AGCAGTGGAC GGTCGCGGCA
CCCGCGCGTC CATCTGCTCC GGTGGTGATG GCGGCACCGC CTCCCGCCCC AATGCCGCAC
AACGGCGACG ACGTCGCGAT CCTGCACATC CCGCGCCTGG GCTCCGGCCT GGACGACGCG
GGAATCCCGG TGCTGGAAGG CGTCGGGCTC GACATCCTGA ACAAGGCCAC CGGCCACTAC
CCGGGCACCG CGCTGCCCGG CCAGATCGGC AACTTCTCGG TCGCCGGCCA CCGCAAGACG
CACGGCGAGC CGTTCCGCCA CCTTGACGAG ATGCGCGCCG GGGACCTGGT CTACGTGGAG
ACCGCGAAGG ATTGGTACAC CTACCGGATC GACGCCGACC CGGTGATTGT CCAGCCCACG
GACCTCGGCG TGGTGGACCC GGTGCCCGGC GAGCCCGGGG TCCGGCCGAC CCAGGATCTC
ATGACCCTGA CAACCTGCAA CCCCTGGTGG TCGTCCACCC AGAGGATGAT CGTGACCGGC
CATTTGATCG CCACGCGGCC GCGAACATGA
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| Protein sequence | MARAGALLRI AIRTVGELLV TSSVLLALFI VYQLYYTNVV GRHVMNQEVN DIHKQWTVAA
PARPSAPVVM AAPPPAPMPH NGDDVAILHI PRLGSGLDDA GIPVLEGVGL DILNKATGHY
PGTALPGQIG NFSVAGHRKT HGEPFRHLDE MRAGDLVYVE TAKDWYTYRI DADPVIVQPT
DLGVVDPVPG EPGVRPTQDL MTLTTCNPWW SSTQRMIVTG HLIATRPRT
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