Gene Caci_8823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8823 
Symbol 
ID8340216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10226713 
End bp10227879 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID644961913 
Producthypothetical protein 
Protein accessionYP_003119477 
Protein GI256397913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.388128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.40576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGATCA CTGTGGGGAC CGCTAGAGAG AACTCCGTGG TCCGTCGCAA GGTGCGTACG 
CGCGCGGCAG CAGTGCTTCT AGCCGGGGCG GTACTAGTGG GAGCCTCGGT CGGCTTCAGT
AGCGGAAACG CTAGAGCGGC CGCGACTCCG AGTCCTGCTC CGCCGTCCCC GAAACCGAGC
GCTCCTGGTT CCCCCAACGA CGCGCACCAG AACGGTTCCT GGTGGGTCCA GCCCGCCCCG
ACGCCGGGTT CGACAGCTGC GGCGCGCCAG TACTTCATCC TGGAGGGCCG TCCGGGTACG
ACGCTGCAAG ACGGTCTGGC GGTGTCCAAC TACACCGACC ACCCGATCAC CTACTACGTG
TACGGAGCCG ACGGCTACAA CACCCCTAGG GACGGCCAGT TCGCGCTCCG GGACCACGGC
TACGCCATGA TCGGCGTCGG CTCGTGGGTG CGTACCGCGT TCCCCACGAT CACCGTTCCG
GCACGCACTT CCACGGTTGT GCCGATCTCC ATAGCGATCC CCGCGAACGC TTCCCCCGGC
GATCACGTCG GCGGCGTATC CGGAATGGAT ACCGCTGTGG AGAGCGTGCA GCAGCAGGGC
AACGTACAGG TCGGTATCAA GCGAGTAGTC GCCGCGCGCC TCTATGTGCA TGTCGACGGA
CCCGCTGTCG GTGGGTTGAC CGTCACTCAA CTGAAAGTCA CGGGATCCGC ATCATTCCCC
GCCTATGTGA GTGACAGTGA CGGAACGGTT ACTGCAACGG TTACTAATAG CGGCAACTTG
CTGGAGTCCC CTAAAGCGCA TCTCCGTGCG ACCGGAATCT TCGGCACGCT GATAGACCGC
ACCGTTCAGC TTCCGCAGAT CCTGCCCGGA CAGAGCATCG ATTTCTCCCA GGCGTGGAAG
AACATGCCGC CCTTTGAGAT CGGAACTCTG CATCTGGATG TCACCGACGA CACCGCTTCT
CCACCGGTGA CATCGTCCGA GGCGCTGTCG CTGACCCTGA TTCCCTGGCT CACGCTGCTG
GTCGCGGCCC TGGTGGTGCT GGCGCTGCTG GTGGGACTTC TGTTCTGGCG GCGCAGAAGG
AATCCGCCGC CGGTCCGTCC CCGGGTCCGG CGGGAGCGGC CCCAGCGGCA CGAGCGGCCC
GAGACAACGA AGGCTGCGGC GCCTTGA
 
Protein sequence
MEITVGTARE NSVVRRKVRT RAAAVLLAGA VLVGASVGFS SGNARAAATP SPAPPSPKPS 
APGSPNDAHQ NGSWWVQPAP TPGSTAAARQ YFILEGRPGT TLQDGLAVSN YTDHPITYYV
YGADGYNTPR DGQFALRDHG YAMIGVGSWV RTAFPTITVP ARTSTVVPIS IAIPANASPG
DHVGGVSGMD TAVESVQQQG NVQVGIKRVV AARLYVHVDG PAVGGLTVTQ LKVTGSASFP
AYVSDSDGTV TATVTNSGNL LESPKAHLRA TGIFGTLIDR TVQLPQILPG QSIDFSQAWK
NMPPFEIGTL HLDVTDDTAS PPVTSSEALS LTLIPWLTLL VAALVVLALL VGLLFWRRRR
NPPPVRPRVR RERPQRHERP ETTKAAAP