Gene Caci_8820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_8820 
Symbol 
ID8340213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp10224182 
End bp10224580 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content61% 
IMG OID644961910 
Productmembrane protein of unknown function 
Protein accessionYP_003119474 
Protein GI256397910 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0866999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.245817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATC TGCTGCTGAA GATCGGTATC AACGGTATCG CCCTGTGGGT CACCACACTG 
GTGGTCTCCG GCGTGAAGAT CCTGGTCGAG CCGAACGCCC CGAACGCCAC CCGGCAGAAG
GTGCTCACCA TCCTGATCGT GGCGATCATC TTCGCCGCGG TGAACACTCT GGTGAAGCCG
CTGGTGCAGA TCGCCACGTT CGGGTTGTTC CTCCTCACCC TCGGGCTGAT CACCTTCGTG
ATCAACGCAC TCATGCTGTT GCTCACCTCG AAGATCTGCG ACCACTACCA GGTGCGCTTC
CACGTGGACG GTCTCGCGGC GGCCCTGATC GGGGCGTTGG TGATCAGCGT GGTCTCCATC
GCCCTGCACG CGATGCTGCC GGACGACGTG AAGCGTTAG
 
Protein sequence
MKNLLLKIGI NGIALWVTTL VVSGVKILVE PNAPNATRQK VLTILIVAII FAAVNTLVKP 
LVQIATFGLF LLTLGLITFV INALMLLLTS KICDHYQVRF HVDGLAAALI GALVISVVSI
ALHAMLPDDV KR