Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_8819 |
Symbol | |
ID | 8340212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 10223176 |
End bp | 10223820 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644961909 |
Product | transcriptional regulator, MarR family |
Protein accession | YP_003119473 |
Protein GI | 256397909 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0213904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.276407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGGTT TTGCCGGATA TGCTCACACC ATGACTGCGG TGGAACAGCG GCTCGGCCAC AAGGTCAAGA GCCTCGAACA GGAACTCAGC GGGGCCAAGG ACGCCGTGCT TCGGCCGATG GGCGTGACGG TCCCCCAGTA CACGGCCCTG CTCGTCATCA ATGACGAGCC CGGCATCAGC GGAGCGGAGT TGGCCCGACG TTGTCTGGTC ACCCCTCAGA CGATGACCAC GGTCCTGGGC AACCTGACCC TCAAGGGATA CATCGAGCGC CGCTCGGTGC CCGGCCAGGG TCGTGCCATG GAGACCACGA TCACCACGGC CGGCAAGCGG ATCCTGGCCA AGGCCGACAA GGAGGTGCTG GCCGTCGAGA AGACACTGGC CGGCACCATG GCGGTCAAGG ACCAGGCCAC GTTCGCCAAG CTGCTGGATC AGGCGCGCGC CCCCTTCACC AAGGAGGAGG CAGCGCCGAA GCCGGTGAAG CGGGCGGTGC GGACCACGGC GAAGAAGACC GCGAAGAAGG CCCCGGCCAA GAAGACCGCG GCGGCCAAGG CCGCCCCGGC CAAGAAGGCC GCTGCCAAGA AGACCGTGAA GAAGGCGGCC GCGAAGAAGA CCGCCAAGAA GACGGCCAAG AAGACCGCGC GCTGA
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Protein sequence | MKGFAGYAHT MTAVEQRLGH KVKSLEQELS GAKDAVLRPM GVTVPQYTAL LVINDEPGIS GAELARRCLV TPQTMTTVLG NLTLKGYIER RSVPGQGRAM ETTITTAGKR ILAKADKEVL AVEKTLAGTM AVKDQATFAK LLDQARAPFT KEEAAPKPVK RAVRTTAKKT AKKAPAKKTA AAKAAPAKKA AAKKTVKKAA AKKTAKKTAK KTAR
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